Gene Information

Name : Cbei_4591 (Cbei_4591)
Accession : YP_001311655.1
Strain : Clostridium beijerinckii NCIMB 8052
Genome accession: NC_009617
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 5318876 - 5319562 bp
Length : 687 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: dsy:DSY3866 hypothetical protein

DNA sequence : 
ATGAAACAAATATTAATTATAGAAGATGATATAAATATCGCTGAACTAGAAAAAGAGTATCTTCAATTAAATGGTTATAA
AGTGGAAATAATTCAGGATGGTATTCAAGGATTAAAAAAAGCTCTTATTGGTACATATGATCTTATAATAGTTGATTTAA
TGCTACCAGGCAAAGATGGGTATGAAATAGTAAGAGAAGTTAGAGAAAAATATGAAATACCTATAATAATAGTATCAGCA
AGAAGTGAAGATATTGATAAAATAAAGGGGTTAGGATTTGGTGCAGATGATTATTTAACAAAACCTTTTAGTCCTGCAGA
ATTAGTAGCCAGAATAAAGTCTCATATGCTTAGATATGAGAGGTTATCAGGAAATAGACCCCAACTCAATATTATTAGCC
ATAAAGCATTGGAGATAAGAACAGATTCACATAAAGTTTTCGTAAATGGAAAAGAGGTTATTCTTACTACAAAGGAGTAT
GAGCTTATGGTATTTTTAGCTTCTAATCCCAATATAGTTTTCACTAAAGATCAATTATTCGATAGAATATGGGGAGAGGA
TTATTACGGAGATACAGCAACTGTGGCAGTCCATATACAAAAGTTAAGAAAGAAGATAGAAAAGGACCCAGGAAATCCAG
AGTATATTGAAACCCTTTGGGGAACAGGATATAGATTTAATTCATAA

Protein sequence : 
MKQILIIEDDINIAELEKEYLQLNGYKVEIIQDGIQGLKKALIGTYDLIIVDLMLPGKDGYEIVREVREKYEIPIIIVSA
RSEDIDKIKGLGFGADDYLTKPFSPAELVARIKSHMLRYERLSGNRPQLNIISHKALEIRTDSHKVFVNGKEVILTTKEY
ELMVFLASNPNIVFTKDQLFDRIWGEDYYGDTATVAVHIQKLRKKIEKDPGNPEYIETLWGTGYRFNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-36 41
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 1e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cbei_4591 YP_001311655.1 two component transcriptional regulator NC_002758.1121390.p0 Protein 8e-34 45
Cbei_4591 YP_001311655.1 two component transcriptional regulator NC_010079.5776364.p0 Protein 8e-34 45
Cbei_4591 YP_001311655.1 two component transcriptional regulator NC_002952.2859858.p0 Protein 8e-34 45
Cbei_4591 YP_001311655.1 two component transcriptional regulator NC_007622.3794948.p0 Protein 8e-34 45
Cbei_4591 YP_001311655.1 two component transcriptional regulator NC_003923.1003417.p0 Protein 8e-34 45
Cbei_4591 YP_001311655.1 two component transcriptional regulator NC_013450.8614146.p0 Protein 8e-34 45
Cbei_4591 YP_001311655.1 two component transcriptional regulator NC_002951.3238224.p0 Protein 8e-34 45
Cbei_4591 YP_001311655.1 two component transcriptional regulator NC_007793.3914065.p0 Protein 8e-34 45
Cbei_4591 YP_001311655.1 two component transcriptional regulator AE016830.1.gene1681. Protein 6e-41 44
Cbei_4591 YP_001311655.1 two component transcriptional regulator AE015929.1.gene1106. Protein 7e-31 43
Cbei_4591 YP_001311655.1 two component transcriptional regulator AF155139.2.orf0.gene Protein 3e-47 43
Cbei_4591 YP_001311655.1 two component transcriptional regulator AM180355.1.gene1830. Protein 3e-42 43
Cbei_4591 YP_001311655.1 two component transcriptional regulator HE999704.1.gene2815. Protein 3e-38 42
Cbei_4591 YP_001311655.1 two component transcriptional regulator FJ349556.1.orf0.gene Protein 1e-45 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cbei_4591 YP_001311655.1 two component transcriptional regulator VFG1702 Protein 8e-37 41
Cbei_4591 YP_001311655.1 two component transcriptional regulator VFG1563 Protein 7e-37 41