Gene Information

Name : Cbei_4521 (Cbei_4521)
Accession : YP_001311586.1
Strain : Clostridium beijerinckii NCIMB 8052
Genome accession: NC_009617
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0078
EC number : -
Position : 5230900 - 5231820 bp
Length : 921 bp
Strand : +
Note : TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; KEGG: cth:Cthe_1869 ornithine carbamoyltransferase

DNA sequence :
ATGAAAAAAGACTTACTAAAAATGGATGATCTTTCTAAAGAGGAAATTCTGGATATTTTAAATTTAGCAGATCAGTTAAA
ATACGAACAAAAACATGGCATAGAACATCATCATCTTAAAGGTAAAAGTTTAGGAATGATTTTTGAAAAATCATCTACTA
GGACCAGAGTTTCCTTTGAAGCCGGCATGTATCAATTAGGTGGAAATTCACTTTTTTTGACTGATAGAGACATGCAAATT
GGTCGTGGTGAGCCAATTGAAGACACTGCTAGAGTTCTTTCTAGATTTATACAAGGCATAATGATTAGAACTTTCTCACA
AGATGAGGTTGAAAAATTAGCTAAATATGCATCAATTCCGGTTATAAATGGATTAACAGATGAAGAACATCCTTGTCAGG
TACTAGCTGATTTAATGACGATAAGGGAAAATAAAAATATATTAGAAGGTCTAAAAGTTGCTTTTATTGGCGATGGTAAC
AACATGGCCAATTCTCTAATGATTGGCTGCCTAAAAGTCGGCATGAATTTTGCAGTTGCATCTCCTGAGAATTATACTGC
ATCTAAGAAATACCTTAATAGAGCTAAAGAGATCGCAGAAAAAGAAGGCGTTACTTTTACAATTACTACATCTCCACTTG
AAGCTGCTAAAGATGCTGATGTTATAATTACTGATGTTTGGGCTAGTATGGGCAGAGAAGGTGAGGCTAATGAGAGGATT
AAAGCCTTTGAAGGATTCCAAGTTAATAAAGAATTAATGACTATTGCTGATAAAAATGCTATGGTGCTTCATTGTCTTCC
TGCTCATAGAGGAGAAGAAATTTCAGCTGAAATTTTAGAAGAACATGCTGATTCAATTTTTGATGAATCTGAAAATAGAT
TACATGCCCAAAAAGCTGTCCTTGTTAAATTAATGAAATAA

Protein sequence :
MKKDLLKMDDLSKEEILDILNLADQLKYEQKHGIEHHHLKGKSLGMIFEKSSTRTRVSFEAGMYQLGGNSLFLTDRDMQI
GRGEPIEDTARVLSRFIQGIMIRTFSQDEVEKLAKYASIPVINGLTDEEHPCQVLADLMTIRENKNILEGLKVAFIGDGN
NMANSLMIGCLKVGMNFAVASPENYTASKKYLNRAKEIAEKEGVTFTITTSPLEAAKDADVIITDVWASMGREGEANERI
KAFEGFQVNKELMTIADKNAMVLHCLPAHRGEEISAEILEEHADSIFDESENRLHAQKAVLVKLMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 9e-50 42
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 4e-46 41
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 4e-46 41
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 3e-46 41
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 5e-46 41
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 5e-46 41
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 4e-46 41