Gene Information

Name : Cbei_3760 (Cbei_3760)
Accession : YP_001310833.1
Strain : Clostridium beijerinckii NCIMB 8052
Genome accession: NC_009617
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 4317406 - 4318209 bp
Length : 804 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dsy:DSY1005 hypothetical protein

DNA sequence : 
ATGAATGAAAAACAACAATTGCTTGAAGCAAAAAATTTAGTAACTGGGTATGAAAAAAAGATTATAGTTGATGGAATTGA
TATAACTATTCCAAGTAATAAAATCAGTGTTATTATTGGAGCAAATGCATGTGGTAAATCAACTTTGCTAAAAACACTTG
CAAGGCTTATAAAGCCAATTTCAGGAGATGTTGTAATTGACGGCAAAAAAATAACTTCAATGCCTTCTAAAAAATTGGCA
CAAGTTTTAGGACTGCTTCCACAATCACCAGTAGTTCCAGAAGGTATAACAGTCTGGGACTTAGTTTCAAGAGGTAGATT
TCCATATCAAGCATTTTTAAAAAGCATGGATAAAAGTGATTTTGATGCAGTAGAAGAGGCACTTGAAATAATGGGAATAA
CAGATCTTGCTAATCGTAGTGTAGATGAACTATCTGGCGGGCAGCGCCAAAGGGTTTGGATAGCTATGGCACTAGCGCAG
CAGACAGATATACTTCTTTTGGATGAGCCGACTACATATCTTGATATTGCTTATCAAGTAGAAATCCTTGATTTATTGAC
GGATCTAAACCGCAGAAGAGGAACTACTATTGTAATGGTCCTTCATGATATAAATTTATCTGCCAGATACGCAGATTATA
TATTTGCTCTTCGGAAGGGAAAACTAATTGGTAAAGGTGAACCATCAAAGGTTATAACATCAGGATTAATCAATGAAGTG
TTTGGATTAGATTGTGTGGTAATACAAGATCCAGTGTCCAATTCACCTTTTATAGTTCCAAGAGGAAGACATCATGTAAA
TTAA

Protein sequence : 
MNEKQQLLEAKNLVTGYEKKIIVDGIDITIPSNKISVIIGANACGKSTLLKTLARLIKPISGDVVIDGKKITSMPSKKLA
QVLGLLPQSPVVPEGITVWDLVSRGRFPYQAFLKSMDKSDFDAVEEALEIMGITDLANRSVDELSGGQRQRVWIAMALAQ
QTDILLLDEPTTYLDIAYQVEILDLLTDLNRRRGTTIVMVLHDINLSARYADYIFALRKGKLIGKGEPSKVITSGLINEV
FGLDCVVIQDPVSNSPFIVPRGRHHVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 7e-77 59
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 7e-77 59
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-64 51
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 4e-47 43
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-52 43
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 5e-51 43
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-51 43
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-51 43
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 5e-51 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cbei_3760 YP_001310833.1 ABC transporter BAC0164 Protein 2e-47 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cbei_3760 YP_001310833.1 ABC transporter VFG0925 Protein 6e-64 49
Cbei_3760 YP_001310833.1 ABC transporter VFG1042 Protein 2e-47 43