|
Name : Cbei_3610 (Cbei_3610) Accession : YP_001310686.1 Strain : Clostridium beijerinckii NCIMB 8052 Genome accession: NC_009617 Putative virulence/resistance : Unknown Product : Tn554-related, transposase C Function : - COG functional category : - COG ID : - EC number : - Position : 4159741 - 4160115 bp Length : 375 bp Strand : + Note : KEGG: bca:BCE_A0002 Tn554-related, transposase C DNA sequence : ATGGCTGGAAGTACAAAAGGTTTAAAGGAATTTGCTCAAAACAAAACTAAGGTAACATTAGAAAAAGTAGATAAAGCCAT TCGAGAGCTGTCGCTTGGCGGACAGAAAATCAACTTCAATAGTGTATCTAATTTAAGTGGTGTATCTAAAACTTTTTTAT ATAATAATGCTGAAATTAAGAAAAGGATTGAAGAACTTAGAGACAAGCAAACCGAAAAAGTTATTAAACAAAGACTTAAA TATGATAAAACTGATAAATCAAAAGACATTATTATAATGGCTAAGGATAAAAAGATTAAAGAATTACAAGAAGAAAATAG GAAACTTAAAGAACAATTAGAAGCTCTTAGAGGGAAATTGTATGAAAAAATGTAA Protein sequence : MAGSTKGLKEFAQNKTKVTLEKVDKAIRELSLGGQKINFNSVSNLSGVSKTFLYNNAEIKKRIEELRDKQTEKVIKQRLK YDKTDKSKDIIIMAKDKKIKELQEENRKLKEQLEALRGKLYEKM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpC | BAB47665.1 | transposase C(Tn554) | Not tested | Type-III SCCmec | Protein | 2e-11 | 42 |
| tnpC | BAC53827.1 | transposase C(Tn554) | Not tested | SRImec-III and SCCmec-III region | Protein | 2e-11 | 42 |
| tnpC | BAC57472.1 | transposase C | Not tested | Type-IIIinv SCCmec | Protein | 2e-11 | 42 |
| tnpC1 | YP_039524.1 | transposase C 1 | Not tested | Type-II SCCmec | Protein | 3e-11 | 42 |
| tnpC | BAA82203.1 | transposaseC | Not tested | Type-II SCCmec | Protein | 2e-11 | 42 |
| tnpC | NP_370578.1 | transposase C | Not tested | Type-II SCCmec | Protein | 3e-11 | 42 |
| tnpC | NP_373290.1 | transposase for Tn554 | Not tested | Type-II SCCmec | Protein | 3e-11 | 42 |
| tnpC-3 | YP_190050.1 | transposase C | Not tested | Type-II SCCmec | Protein | 3e-11 | 42 |
| unnamed | BAB47607.1 | transposase C of Transposon Tn554 | Not tested | Type-III SCCmec | Protein | 2e-11 | 41 |
| tnpC | BAC57489.1 | transposaseC | Not tested | Type-IIIinv SCCmec | Protein | 2e-11 | 41 |
