Gene Information

Name : Cbei_3549 (Cbei_3549)
Accession : YP_001310627.1
Strain : Clostridium beijerinckii NCIMB 8052
Genome accession: NC_009617
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 4098470 - 4098676 bp
Length : 207 bp
Strand : +
Note : PFAM: helix-turn-helix domain protein; KEGG: dsy:DSY0155 hypothetical protein

DNA sequence :
GTGAAAAATCGTTTAGAGGAAATACGAAAAAAGCATGGCATAAAACAAGAAGAGTTGGCAATTGCTCTTGAAGTATCGAG
GCAAACAATTGGATCACTGGAAAACGGAAGATATAATCCTTCAATTATATTAGCATTTAAAATTGCAAACTATTTTAATA
TGAGTATCGAAGAAATTTTTATTTATGAGGAGGAACAAATAAAATGA

Protein sequence :
MKNRLEEIRKKHGIKQEELAIALEVSRQTIGSLENGRYNPSIILAFKIANYFNMSIEEIFIYEEEQIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 8e-07 55
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 6e-07 55
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 8e-09 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cbei_3549 YP_001310627.1 XRE family transcriptional regulator VFG2168 Protein 2e-07 55
Cbei_3549 YP_001310627.1 XRE family transcriptional regulator VFG2175 Protein 2e-07 55