Gene Information

Name : Cbei_3483 (Cbei_3483)
Accession : YP_001310563.1
Strain : Clostridium beijerinckii NCIMB 8052
Genome accession: NC_009617
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 4027115 - 4027351 bp
Length : 237 bp
Strand : -
Note : PFAM: helix-turn-helix domain protein; KEGG: cac:CAC2473 predicted transcriptional regulator

DNA sequence :
ATGAAAAATAAACTAAAAGAATTTCGTGAAGCTGTTGGATTAACGCAGGAACAATTGGGAGCTCTTGTAGGAGTATCAAG
GCAGGCAATAAACTCTATTGAAACAGAAAAATATGAGCCATCTATATGGCTAGCTTATGATATTTCTCAAATATTTCATT
GTGCAATAGAGGAAGTGTTTCTTTTTGAACAAAGTGAAAGAAAATCAAGAGCACAATTAAGTAGAGGTGTAGTTTAA

Protein sequence :
MKNKLKEFREAVGLTQEQLGALVGVSRQAINSIETEKYEPSIWLAYDISQIFHCAIEEVFLFEQSERKSRAQLSRGVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 4e-06 45
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 3e-06 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cbei_3483 YP_001310563.1 XRE family transcriptional regulator VFG2175 Protein 1e-06 45
Cbei_3483 YP_001310563.1 XRE family transcriptional regulator VFG2168 Protein 1e-06 45