Gene Information

Name : Cbei_3456 (Cbei_3456)
Accession : YP_001310537.1
Strain : Clostridium beijerinckii NCIMB 8052
Genome accession: NC_009617
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 4003101 - 4003307 bp
Length : 207 bp
Strand : -
Note : PFAM: helix-turn-helix domain protein; KEGG: cpe:CPE0258 probable transcriptional regulator

DNA sequence :
ATGGAAGAACTGGTATTGCATAATAATTTAAAGGAAGTCAGAACAGAACAAAAATTATCTCAATCTCAATTGGCAGAAAT
GGTTGGTGTATCAAGAAATACAATTAGCTCTATTGAGACAGGGGAATTTAATCCTACTGCAAAATTAGCGCTTGTTCTTT
GCGTCGCGTTAGATAAAAAATTTGAAGAATTATTTTATTTTGATTGA

Protein sequence :
MEELVLHNNLKEVRTEQKLSQSQLAEMVGVSRNTISSIETGEFNPTAKLALVLCVALDKKFEELFYFD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 1e-06 47
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 9e-07 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cbei_3456 YP_001310537.1 XRE family transcriptional regulator VFG2168 Protein 4e-07 47
Cbei_3456 YP_001310537.1 XRE family transcriptional regulator VFG2175 Protein 4e-07 47