Gene Information

Name : Cbei_3325 (Cbei_3325)
Accession : YP_001310408.1
Strain : Clostridium beijerinckii NCIMB 8052
Genome accession: NC_009617
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 3870664 - 3871368 bp
Length : 705 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ctc:CTC00625 lantibiotic transport ATP-binding protein spaF/mutF

DNA sequence :
ATGAACGAATTTATTTTAGAAACAAAAAACTTATGTAAAAACTTTAAAAAGCAAGAAGCAGTTAAAGATATTTCAGTATT
AGTTAAAAAGAATTCAATATATGGGTTGCTTGGTCCAAATGGAGCAGGAAAGTCAACACTATTAAAGATGGTTACGGGAA
TGCTTAGACCAAGTTCGGGAGAAATCTTATTTGATGGACATAAATGGAGTAGAAAGGATTTACGCGAAATTGGGTCATTA
ATAGAATCAGCGCCTTTATATGAAAATCTAACGGCAAAAGAGAATTTAAAGGTTCGTACTACAGTACTTGGATTACCGGA
CTCAAGAATTGAAGAAGTTCTTCATGTAGTAGAGCTTGAAAATACAGGTAAAAAGAGAGCAGGACAATTTTCTATGGGAA
TGAAGCAGAGATTGGGGATTGCTATTGCATTACTTAATAATCCTAAACTCTTAATTTTAGATGAGCCAACTAACGGACTT
GATCCATTTGGAATACAAGAATTAAGAGAGTTAATACGATCCTTTCCCAAGAAAGGCATTACGGTAATATTATCCAGTCA
TATGTTAAGTGAAGTAGAACAGATTGCTGATCATATTGGAATTATATCTGGCGGTATTTTAGGATATCAAGGAGAATTAA
AAAAAGGTGAAGATTTAGAAAAATTATTTATAGATATCGCTAAACAATATAGGAGGGAGAAATAA

Protein sequence :
MNEFILETKNLCKNFKKQEAVKDISVLVKKNSIYGLLGPNGAGKSTLLKMVTGMLRPSSGEILFDGHKWSRKDLREIGSL
IESAPLYENLTAKENLKVRTTVLGLPDSRIEEVLHVVELENTGKKRAGQFSMGMKQRLGIAIALLNNPKLLILDEPTNGL
DPFGIQELRELIRSFPKKGITVILSSHMLSEVEQIADHIGIISGGILGYQGELKKGEDLEKLFIDIAKQYRREK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cdd4 CAA63569.1 - Not tested PaLoc Protein 3e-47 52
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 3e-44 49
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 3e-44 49
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 3e-44 49
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 2e-44 49
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 5e-42 49
SPN23F_09830 YP_002510959.1 lantibiotic transport ATP-binding protein Not tested PPI-1 Protein 1e-31 45
CD241_0087 YP_005124356.1 ABC transporter ATP-binding protein Not tested Not named Protein 7e-39 43
DIP0090 NP_938487.1 ABC transporter ATP-binding protein Not tested Not named Protein 4e-39 43
Spaf_1123 YP_006309925.1 putative transport ATP-binding protein Not tested FWisland_1 Protein 6e-30 42