Gene Information

Name : Cbei_0262 (Cbei_0262)
Accession : YP_001307407.1
Strain : Clostridium beijerinckii NCIMB 8052
Genome accession: NC_009617
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 318130 - 318828 bp
Length : 699 bp
Strand : +
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dsy:DSY3669 hypothetical protein

DNA sequence :
ATGTTTTTAGAAGTTAGAGATGCGAAAAAGGCATATGGACAAGGTGACATTAAGGTGCAGGTACTAAACGGGGTGAACTT
TAACTTAGAAGAAAAGAAGATATGCACCATTTTAGGACCCTCTGGATCTGGTAAATCAACCATATTAAACGTTATTGGTG
GATTGGAAAGTATAGATTCAGGTGATGTAACTGTTGATGGTATTACAACTTCAAGTTTAAATTCCAAGGATTTAGCATTT
TATAGAAGAGATAAATTAGGATTTATATTTCAATTTTATAATCTTGTTCCTAACCTTACTGTTAAAGAGAATATAGAAGT
ATGTGAGTATCTTACCAAGACCCCATTAGATATAGAAGAATTATTAAAAACACTGGGATTATGTGAACATCAAGATAAAT
TTCCAAGGCAGTTGTCAGGAGGACAGCAGCAGAGAACTGCTATAGCTAGAGCACTTATTAAGAATCCTAAGTTATTACTT
TGTGATGAGCCTACAGGTGCACTAGATTATAAAACATCTAAAGAAATTCTTGAACTTCTAGAATCTGTTAACAGAAAATA
TGGTACAACTATGATAATAGTTACCCATAATGATGCTATAAAATATATGTCCCATAAAGTAGTAAAAGTTAGAGATGGAA
TAATTGAGGATGAATATGAAAATGAAGCGATAATGGAAGCAAAGGATATTACTTGGTAG

Protein sequence :
MFLEVRDAKKAYGQGDIKVQVLNGVNFNLEEKKICTILGPSGSGKSTILNVIGGLESIDSGDVTVDGITTSSLNSKDLAF
YRRDKLGFIFQFYNLVPNLTVKENIEVCEYLTKTPLDIEELLKTLGLCEHQDKFPRQLSGGQQQRTAIARALIKNPKLLL
CDEPTGALDYKTSKEILELLESVNRKYGTTMIIVTHNDAIKYMSHKVVKVRDGIIEDEYENEAIMEAKDITW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-33 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-33 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-33 41
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cbei_0262 YP_001307407.1 ABC transporter NC_012469.1.7685735. Protein 3e-48 45
Cbei_0262 YP_001307407.1 ABC transporter CP001581.1.gene798.p Protein 7e-42 44
Cbei_0262 YP_001307407.1 ABC transporter CP001581.1.gene598.p Protein 1e-37 41
Cbei_0262 YP_001307407.1 ABC transporter NC_012469.1.7686878. Protein 3e-33 41