|
Name : ulaA (Cbei_2739) Accession : YP_001309846.1 Strain : Clostridium beijerinckii NCIMB 8052 Genome accession: NC_009617 Putative virulence/resistance : Virulence Product : PTS system ascorbate-specific transporter subunit IIC Function : - COG functional category : S : Function unknown COG ID : COG3037 EC number : - Position : 3183554 - 3184912 bp Length : 1359 bp Strand : - Note : membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr DNA sequence : ATGTCAGTTCTTGAGTTTTTTAGAGACGTATTGAAACAGCCGGCTTTATTAATGGGAATTATGTCATTCGTTGGACTTAT TGCACTTAAGAAACCTGGTCATAAAATTATGACGGGAACTTTAAAACCTATACTTGGTTACTTGATGCTTGGCGCTGGAG CAGATTTTATTACCTCTAACCTAGATCCTCTTGGAAAAATGATACAAGAGGGATTTCATATAGATGGAGTTGTTCCAAAT AATGAAGCTATTGTTTCTGTTGCACAAAAAGTATTAGGCGTAGAGACAATGACAATTTTAATTGTAGGACTTTTAATTAA TTTATTGATAGCAAGATTTACAAAATTTAAATATGTCTTTTTAACAGGTCATCATAGTTTTTTCATGGCTTGCCTTTTAT CAGCTGTTCTTGGGACAACAGGTATGAGCGGAACTGAATTAATATTATTCGGTGGATTCTTACTTGGAGCATGGAGTTCA ATATCTCCTGCGATAGGACAAAGATTTACTAGAAAAGTAACTGATGGTGACGATATTGCACTAGGTCACTTTGGTAGTTT AGCGTACTATATTTCAGCATGGGTAGGATCTAAGGTAGGAAAACCTGAAGAAAGTACTGAAAAAATTGAAATACCAGAGA AATGGGGATTTTTAAGAGATACAACTATTTCTACTGCATTAACAATGATGATATTTTATTTAATTGCAGCAATAGCGGCA GGTCCAACTTTTGTAGCAACTATTTCAGATGGTACTTCACCTATATTATTTGCTCTTATGGCAGGATTAAAATTTGCAGT TGGAGTAACAATTGTTTACAGTGGTGTTAGAATGATTCTTGGTGATCTTATTCCAGCATTCCAAGGTATTGCAACTAGAA TTATCCCTGATGCCGTACCAGCTGTTGACTGTGCAGTATTCTTTACTTATGCACCTACAGCTGTTGTTATAGGATTTGTA TCTTCTTTCATTGGTGGTGTTATTGGCATGATTCTTTTAGGATTTGCAGGAGGAGTATTGATAATTCCAGGACTAGTACC TCACTTTTTCTGTGGAGCAACTGCTGGAATATTTGGTAATGCAACTGGTGGTCGTAAAGGTGCTATGGTAGGTTCATTTG TAAACGGGCTTTTGATTACTTTTGCACCAGCATTACTTTTACCTGTACTTGGTTCATTAGGATTCCAAAACACAACTTTT GGTGATTTTGATTTTGGAGTTTTAGGTATTATACTTGGTAAAGCATCAGAATTAATAGGTAAATTTGGTGTTATAGCTAT TGTTGTTATATTACTAGTAGTTTTAATTGTTCCTAATTTCATAAAAACTAAATCAAAAGCAATTAATAATTTAGATTGA Protein sequence : MSVLEFFRDVLKQPALLMGIMSFVGLIALKKPGHKIMTGTLKPILGYLMLGAGADFITSNLDPLGKMIQEGFHIDGVVPN NEAIVSVAQKVLGVETMTILIVGLLINLLIARFTKFKYVFLTGHHSFFMACLLSAVLGTTGMSGTELILFGGFLLGAWSS ISPAIGQRFTRKVTDGDDIALGHFGSLAYYISAWVGSKVGKPEESTEKIEIPEKWGFLRDTTISTALTMMIFYLIAAIAA GPTFVATISDGTSPILFALMAGLKFAVGVTIVYSGVRMILGDLIPAFQGIATRIIPDAVPAVDCAVFFTYAPTAVVIGFV SSFIGGVIGMILLGFAGGVLIIPGLVPHFFCGATAGIFGNATGGRKGAMVGSFVNGLLITFAPALLLPVLGSLGFQNTTF GDFDFGVLGIILGKASELIGKFGVIAIVVILLVVLIVPNFIKTKSKAINNLD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF8 | AAK27335.1 | unknown | Not tested | PAI-I AL862 | Protein | 1e-92 | 50 |
| unnamed | CAC39291.1 | hypothetical protein | Not tested | LPA | Protein | 7e-93 | 50 |
| vpeC | ADD91725.1 | putative PTS system-specific IIC component VpeC | Virulence | PAI-I AL862 | Protein | 7e-93 | 50 |
