Gene Information

Name : Cbei_2321 (Cbei_2321)
Accession : YP_001309437.1
Strain : Clostridium beijerinckii NCIMB 8052
Genome accession: NC_009617
Putative virulence/resistance : Unknown
Product : alpha,alpha-phosphotrehalase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0366
EC number : -
Position : 2687048 - 2688700 bp
Length : 1653 bp
Strand : +
Note : TIGRFAM: alpha,alpha-phosphotrehalase; PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: cpe:CPE0562 trehalose-6-phosphate hydrolase

DNA sequence :
ATGAAGGATTTTAAGAAAAGTACTATTTATCAAATATATCCTAAATCATTTTATGATACAAACGGTGATGGAATTGGAGA
TTTAAACGGAGTAATAGAAAAATTAGATTATTTAAAAAATTTAGGTATAGATTATATATGGCTTACTCCTTTTTATCCTT
CTCCTCAAGTAGATAACGGATATGATATCTCTGATTACTATAATATTGATCCAAGCTTTGGTACATTAGAAGACTTTGAA
AAATTAGTACAAGAAGCAGAAAGAAGAGATATATATGTAATGCTTGATATGGTGCTTAATCATACATCAACAGAACATGA
ATGGTTCAAAAAAGCTATAAGCGGAGATAGAAAATATAAAGATTTCTATATATTTAAAGAATCAGGAAAAGATAAACCAC
CTACAAATTGGGAATCTAAATTTGGTGGGAATGCATGGGAATATGTAGAAAAGTTTGATGAATATTACCTACATCTTTTT
GATAGAACTCAGGCGGATTTGAATTGGGATAATGAAGAAGTTAGAAATGAGATTTATGGTGTTGTTAACTTTTGGCTTAA
AAAAGGTGTCAAAGGATTAAGGTTTGATGTTATAAATTTAATTTCAAAACCAGAAAAGTTTGAAAGTGATTCAGAAGGTG
ATGGAAGAAGATTCTATACAGATGGTCCTAAAATTCATGACTATCTCCACGAGCTTAATGAAAATACCTATGGAAAATAT
GAAGATATTGTAACTGTAGGAGAAATGTCATCAACTTCTCTTGAGAATTGTATAAGATATTCTAATCCAGAAGAAAAAGA
ATTATCAATGGTATTTAATTTCCACCATTTAAAAGTTGATTACTATAAAGGCGATAAATGGACTGTTATGGATTTTGACT
TTATGAAGTTGAAGGCGTTATTTAAAACTTGGCAAGAAGAAATTCAAAATGGGTGGAATGCTCTGTTTTGGTGTAATCAT
GATCAGCCTAGAATAGTTTCTAGGTTTGGAAATGATAAAGAATATTTAAAAGAAAGTGCTAAAATGCTGGCAACTACAAT
ACACATGATGAGGGGAACTCCATATGTGTATCAAGGTGAAGAGATTGGAATGACAAACCCTTATTTCGATAACATAGAGA
AGTATAGAGATGTAGAATCTATAAATTATTATAATATTTTAAAAGAGCAAGGAAAGTCTGAAGAAGAGATATTACAGATT
TTAAAAGCAAAATCTCGTGATAATTCTAGAACTCCAGTACAATGGGATGATAGTGAAAATGCTGGATTTACTAAAGGTGA
ATCATGGATACCTGTTAGCAGTGAATATAAAAGAATAAATGTTGAACAAGCGCTAAAGGATGAAGATTCGATTTTCTATC
ATTATCAAAAGCTAATAAGGTTGAGAAAAGATTATGAAGTGATTTCAAATGGAAGTATAAAGTTTATTCTTGAAGAAAAT
AATAAAGTACTTTCATATGTAAGAAATTTAGGCGACGCTACAGTACTTGTCATAAATAATTTTTATGGAGAAAGTACAAA
AGTAGAGATTCCAGATGAATATGCAAATGAAAGTGCTAAGAGTAAAATATTAATATCGAATTATAAAGATAGTAGTGTAT
TAAATAAAGAGTTAAATTTAAGACCATTTGAATCAATTGTATATCATATATAG

Protein sequence :
MKDFKKSTIYQIYPKSFYDTNGDGIGDLNGVIEKLDYLKNLGIDYIWLTPFYPSPQVDNGYDISDYYNIDPSFGTLEDFE
KLVQEAERRDIYVMLDMVLNHTSTEHEWFKKAISGDRKYKDFYIFKESGKDKPPTNWESKFGGNAWEYVEKFDEYYLHLF
DRTQADLNWDNEEVRNEIYGVVNFWLKKGVKGLRFDVINLISKPEKFESDSEGDGRRFYTDGPKIHDYLHELNENTYGKY
EDIVTVGEMSSTSLENCIRYSNPEEKELSMVFNFHHLKVDYYKGDKWTVMDFDFMKLKALFKTWQEEIQNGWNALFWCNH
DQPRIVSRFGNDKEYLKESAKMLATTIHMMRGTPYVYQGEEIGMTNPYFDNIEKYRDVESINYYNILKEQGKSEEEILQI
LKAKSRDNSRTPVQWDDSENAGFTKGESWIPVSSEYKRINVEQALKDEDSIFYHYQKLIRLRKDYEVISNGSIKFILEEN
NKVLSYVRNLGDATVLVINNFYGESTKVEIPDEYANESAKSKILISNYKDSSVLNKELNLRPFESIVYHI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 5e-124 47