|
Name : Cbei_2141 (Cbei_2141) Accession : YP_001309264.1 Strain : Clostridium beijerinckii NCIMB 8052 Genome accession: NC_009617 Putative virulence/resistance : Virulence Product : ABC transporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1120 EC number : - Position : 2497221 - 2498009 bp Length : 789 bp Strand : + Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cpf:CPF_0810 ferrichrome ABC transporter ATP-binding protein DNA sequence : ATGGAAGCGATTAGTGTAAAAAATTTATCCGTAGCCTATGAAGATAATTTAATAATAGATAATATGAACCTCTCGATTCC AAAGGGAGAAATAAGTATAATCATAGGAGCCAATGGATGTGGAAAATCAACTCTGCTTAAGACTATAGGGAGAATAATAA AACCAAAGAACGGTGAAATTTTTGTAAATGAAAAGAATATAAAAAAACAAAAGGAAAAAGAAATAGCAACTCAGGTTGCC TTCTTGCCTCAGGGGCCAACATGTCCAAGTGGAATTACTGTTAAAGAATTAGTTGCCTACGGAAGATTTCCACATCAAAA GATGATTGGAGGCCTAAACAGCCACGACAAGGAAATCATAGATTGGGCAATAGAAGAGACAGGTCTTAAGGAGTTTGCGG ACAGGGAAATAGATAATCTATCTGGAGGCCAGAGGCAGAGAGCATGGATTGCAATGACCTTGGCTCAGGAAACAGATATA ATCATGTTAGATGAGCCTACAACTTATTTAGATATGTCTTACCAACTTGAAGTATTAGAGGTATTAGAGAGATTAAATAA AAAGAATAATATCACTGTTGTAATAGTTCTTCATGAATTAAATAATGCCTGCAGATTTGCAAGTAATATCATTGGACTAA AGCAGGGGAAAATCATATGCAAGGGTATTCCTAGGGAAGTAATAACACAAGAAAACTTAAGAAAAATCTACGGAATAGAT GTTAAATTACAATTAAGTGAAAATGGTGAGTATCCAATCTGCGTAGAATATGAACTTATGAGAGGATAA Protein sequence : MEAISVKNLSVAYEDNLIIDNMNLSIPKGEISIIIGANGCGKSTLLKTIGRIIKPKNGEIFVNEKNIKKQKEKEIATQVA FLPQGPTCPSGITVKELVAYGRFPHQKMIGGLNSHDKEIIDWAIEETGLKEFADREIDNLSGGQRQRAWIAMTLAQETDI IMLDEPTTYLDMSYQLEVLEVLERLNKKNNITVVIVLHELNNACRFASNIIGLKQGKIICKGIPREVITQENLRKIYGID VKLQLSENGEYPICVEYELMRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SPN23F_09560 | YP_002510939.1 | ferric siderophore ABC transporter ATP-binding protein | Virulence | PPI-1 | Protein | 1e-50 | 44 |
| SP_1035 | NP_345510.1 | iron-compound ABC transporter ATP-binding protein | Not tested | PPI-1 | Protein | 1e-50 | 44 |
| iusE | YP_005143742.1 | iron ABC transporter ATP-binding protein | Virulence | Not named | Protein | 1e-48 | 43 |
| fagC | YP_003782430.1 | ABC transporter ATP-binding protein | Not tested | PiCp 1 | Protein | 5e-47 | 42 |
| fagC | YP_005682397.1 | ATP binding cytoplasmic membrane protein | Virulence | PiCp 1 | Protein | 4e-47 | 42 |
| fagC | YP_005684488.1 | ATP binding cytoplasmic membrane protein | Not tested | PiCp 1 | Protein | 4e-47 | 42 |
| fagC | YP_005680307.1 | ATP binding cytoplasmic membrane protein | Not tested | PiCp 1 | Protein | 5e-47 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Cbei_2141 | YP_001309264.1 | ABC transporter | VFG0925 | Protein | 2e-52 | 47 |
