Gene Information

Name : Cbei_1808 (Cbei_1808)
Accession : YP_001308935.1
Strain : Clostridium beijerinckii NCIMB 8052
Genome accession: NC_009617
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2091014 - 2091757 bp
Length : 744 bp
Strand : +
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dsy:DSY3619 hypothetical protein

DNA sequence : 
GTGTCTTTGAGTAAAAATATAATAGAAATGAAAGACATTACAAAAAGCTTCTATATTGGGACTCCAAATCAATTAAATAT
TTTAAAAGGAATTGATATTAGTGTAAAAGAAGGAGAATTTGTAGCAATAGTTGGTTCATCTGGTTCTGGAAAAAGTACAT
TAATGAATATTATAGGAGCACTTGATAGAGCAACTTCTGGGAACTATATTTTAGATGGTACAAATATCAATGAAATATCT
GATAATGGTTTATCTGAAGTAAGAAATAAACAAATAGGTTTTGTATTTCAGACATATAATCTAATTCCAAGAAGTTCAGC
TTTGAAAAATGTTGAATTGCCAATGCTTTACTATGGAATGAGTAAAAAAGATAGAAGAATACGTGCAGAAGAACTTTTAG
ATCTTGTTGGAATGAAAGATAGAATGTCTCATCAACCAAATGAACTGTCAGGAGGACAAAAGCAGAGAGTGGCTATTGCT
AGAGCATTAGCTAATGACCCAAGTATAATACTTGCAGATGAGCCTACAGGTGCACTCGATTCAACGACTGGAAGATTGGT
TATGGATTTGTTTCATAAAGTTCATGAACAGGAAGGCAAAACCATTGTATTTATAACCCATAATAGCGAACTTGCTGAGG
AAACAGAAAGAATTATAACTTTGAAGGATGGAAATATAATATCTGAAAAAAAGAATGATATGTACTACAGAAGATTTCCA
AAAGAGGACAAAGTATGTTTATAA

Protein sequence : 
MSLSKNIIEMKDITKSFYIGTPNQLNILKGIDISVKEGEFVAIVGSSGSGKSTLMNIIGALDRATSGNYILDGTNINEIS
DNGLSEVRNKQIGFVFQTYNLIPRSSALKNVELPMLYYGMSKKDRRIRAEELLDLVGMKDRMSHQPNELSGGQKQRVAIA
RALANDPSIILADEPTGALDSTTGRLVMDLFHKVHEQEGKTIVFITHNSELAEETERIITLKDGNIISEKKNDMYYRRFP
KEDKVCL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-32 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cbei_1808 YP_001308935.1 ABC transporter NC_012469.1.7686878. Protein 1e-53 55
Cbei_1808 YP_001308935.1 ABC transporter CP001581.1.gene798.p Protein 8e-39 47
Cbei_1808 YP_001308935.1 ABC transporter CP001581.1.gene598.p Protein 2e-37 43
Cbei_1808 YP_001308935.1 ABC transporter NC_008702.1.4606598. Protein 1e-40 41