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Name : Cbei_1506 (Cbei_1506) Accession : YP_001308638.1 Strain : Clostridium beijerinckii NCIMB 8052 Genome accession: NC_009617 Putative virulence/resistance : Resistance Product : D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit Function : - COG functional category : C : Energy production and conversion COG ID : COG1052 EC number : - Position : 1777662 - 1778645 bp Length : 984 bp Strand : + Note : PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: cac:CAC1543 lactate dehydrogenase DNA sequence : ATGAGAATTTTAGCATATAGTCATAGGCGTGATGAAACACAGTATTTCGAAGAATTTAGTAAAAAGTATAATGTTGAAGT TGTTTTATGTAATGAGGAACCAAGTTTAGAAACAGCACCTCTTGCAAAAGGTTTTGATTGTATCAGTATAATTACAACAA ATATAAACTCAGAATTAGTTGGAAAATTTCATGAGTTAGGTGTCAAATTTATATCAACAAGGACTATTGGATATGATCAT ATAGATTTGAAAAAGGCTAAGGAACTTGGGGTTCGTGTAGGGAATGTGACGTATTCACCAAATAGCGTAGCAGATTATAC TATAATGTTAATATTAATGGCAGTTAGAAAAGTCAAACTTATAATGGAAAGAAGCAATGTGCAAGACTTTTCTTTAAGGG GTATTCAAGGTAAGGAATTACCTAACTTGACTATAGGTGTTGTAGGGACAGGGAAAATAGGGAGGACCGTTATCAAGCAT TTAAGTGGTTTTGGTTGTAAGATATTAGCACATGATATATATGAAAATGATGAAGTGAAATCAAATGCTAAGTATGTAGA TTTGGAAAATTTATTTAAATATAGTGATATTATAACATTGCATATGCCGGCTACAGATGATAATTATCATATAATTAATA AGAAAGCCATTAAATTAATGAAAGATGGAGTCTTTATTATTAATACTGCCCGTGGATCATTAATTAATACAAATGATTTA ATACATGGAATTGAAAGTAAAAAGATAGGAGGAGCTGCTTTAGATGTTATTGAACAGGAATCTAATATTTATTATAGTGA TCTAAAGGGAGAGGCTTTAAAAAATAGAAATTTAGCTATTCTAAAGTCTTTTCCTAATGTAATAATAACACCTCATGCAG CTTTTTATACAGATCAAGCGGTAAGTGATATGATTGAAAATTCAATAAAAAGCTGCATATTATTCTCAGAAAATAAGGAA AACCCATGGGAGATAGATATATAA Protein sequence : MRILAYSHRRDETQYFEEFSKKYNVEVVLCNEEPSLETAPLAKGFDCISIITTNINSELVGKFHELGVKFISTRTIGYDH IDLKKAKELGVRVGNVTYSPNSVADYTIMLILMAVRKVKLIMERSNVQDFSLRGIQGKELPNLTIGVVGTGKIGRTVIKH LSGFGCKILAHDIYENDEVKSNAKYVDLENLFKYSDIITLHMPATDDNYHIINKKAIKLMKDGVFIINTARGSLINTNDL IHGIESKKIGGAALDVIEQESNIYYSDLKGEALKNRNLAILKSFPNVIITPHAAFYTDQAVSDMIENSIKSCILFSENKE NPWEIDI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| vanHB | YP_008394258.1 | VanH protein, D-specific alpha-keto acid dehydrogenase | Not tested | Not named | Protein | 3e-65 | 45 |
| EF2295 | NP_815952.1 | D-specific alpha-keto acid dehydrogenase | Not tested | Not named | Protein | 3e-64 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Cbei_1506 | YP_001308638.1 | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit | AF155139.2.orf4.gene | Protein | 1e-64 | 46 |
| Cbei_1506 | YP_001308638.1 | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit | NC_014475.1.orf2.gen | Protein | 9e-63 | 45 |
| Cbei_1506 | YP_001308638.1 | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit | NC_005054.2598279.p0 | Protein | 9e-63 | 45 |
| Cbei_1506 | YP_001308638.1 | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit | AF310956.2.orf4.gene | Protein | 1e-65 | 45 |
| Cbei_1506 | YP_001308638.1 | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit | FJ349556.1.orf3.gene | Protein | 3e-63 | 45 |
| Cbei_1506 | YP_001308638.1 | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit | U35369.1.gene5.p01 | Protein | 2e-64 | 43 |
| Cbei_1506 | YP_001308638.1 | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit | AF130997.1.orf3.gene | Protein | 2e-59 | 41 |
