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Name : Cbei_1444 (Cbei_1444) Accession : YP_001308578.1 Strain : Clostridium beijerinckii NCIMB 8052 Genome accession: NC_009617 Putative virulence/resistance : Unknown Product : alpha amylase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 1699187 - 1700851 bp Length : 1665 bp Strand : + Note : PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: lmf:LMOf2365_0270 oligo-1,6-glucosidase DNA sequence : ATGAAGAAATGGTGGCACGACAAGGTAGCATATCAAATATATCCAAAAAGTTTTTGCGATTCAAATGGAGATGGTATAGG TGATTTAAAGGGGATTATCAGTAAGCTTGATTATTTAAAAGACCTGGGAGTGGATATAATTTGGCTATCACCAATTTATT GTTCTCCTTTAGTAGATCAAGGTTATGATATATCTGATTATTATAATATTGATCCAAGGTTTGGAACTATGGAGGATATG GATGAACTTCTAAGGCAAGCAAAAAAAAGAAATATGTATATATTAATGGATTTAGTAGTCAACCACTGCTCAGATAAGCA TGAGTGGTTTAAGAAAGCATTGGATGATCCAGAAGGAGAATATGCAGATTATTTCTATATTCGTGAAGGTAAAGGTGATA ATCCTCCTTGTAATTGGCGCTCTTACTTTGGCGGAAGCGTATGGGAAAAGATACCTAATACCAATAAATATTATCTGCAT TTATTTGCAAAAGAGCAGCCAGACTTAAATTGGGAAAATCCGAAACTAAAAAATGAAATATTTAAGATGGTTAACTGGTG GCTTGAAAAAGGATTAGCAGGTTTCAGAATTGATGCCATTATTAACATAAAAAAGGATTTAAGATTTCAAGACTTTCCAG CTGATAGAGAAGATGGACTTTGCAGTATAGATAGAATGCTAGAAGCAGCAGAAGGTGTAGGGAACATGTTACATGAGTTA AAAGAGAAAACCTTCGAAAAATTTGATGCATTTACAGTTGGAGAAGTCTTCAACAGAAAAGAAGGAGAACTTGATAAATT TATAGGTGAAGACGGATACTTCTCTTCTATCTTCGATTTTGAGATGGAAGTCTTGGGAAAAAGTGAATTTGGTTGGTATG ATAATAAACCTTTCTCAATTAACGAGTTAAGAAAAGCTATTTTTAACAGTCAATTAGAGACAAGTGGAGTAGGTTTTAAG GCTAATATTATTGAAAATCATGATGAGCCGAGAGGGGTAAGTAGATATATTCCTGAACAAGGCTTAAATGATAGAAGCAA GAAAATGCTTGGGGCAATATCGCTTATGCTTAGAGGAATACCGTTTATTTATCAGGGACAAGAGATTGGAATGACAAATA ACAAATTCAATTCCATAAAAGAATTTGACGATATTGCAACAATAGACCAATATAATGTAGCTATTGAAAAAGGATATAGT GATGAAGAAGCACTAAAAATTATAAATATATTTAGCAGAGACAATGCTAGAACACCGTTCCAGTGGAGTGGAAGTGAAAA TGCAGGCTTTACAACTGGCAGGCCTTGGCTTAAAGTCAATGAAAATTATAAAGTTATTAATGCAAATTTACAAATTGAAG ATGAAGAATCAGTATTTAATTTTTATAAGAAGCTGATAAATTTAAGAAAGTCAGAAGAATTTAAAGATGCCATAGTATAC GGAGAATTCGTACCGACATTTGAGGAATATGATAACTTGTTTGCTTTTTATAGACAAGGAGAATCTAAGAAATTAATGAT ACTTGCAAATTACCAAAAGGAAGAGCAAATTATTGAGTTAGACAAACAATATGTTAAAGTGTTAATCAATAATTGTGAAG AAATAAAGAAAGATAAGAATAAAATCATATTGCAAGGATATCAAGTACTTATTCTTGAAGTTTAG Protein sequence : MKKWWHDKVAYQIYPKSFCDSNGDGIGDLKGIISKLDYLKDLGVDIIWLSPIYCSPLVDQGYDISDYYNIDPRFGTMEDM DELLRQAKKRNMYILMDLVVNHCSDKHEWFKKALDDPEGEYADYFYIREGKGDNPPCNWRSYFGGSVWEKIPNTNKYYLH LFAKEQPDLNWENPKLKNEIFKMVNWWLEKGLAGFRIDAIINIKKDLRFQDFPADREDGLCSIDRMLEAAEGVGNMLHEL KEKTFEKFDAFTVGEVFNRKEGELDKFIGEDGYFSSIFDFEMEVLGKSEFGWYDNKPFSINELRKAIFNSQLETSGVGFK ANIIENHDEPRGVSRYIPEQGLNDRSKKMLGAISLMLRGIPFIYQGQEIGMTNNKFNSIKEFDDIATIDQYNVAIEKGYS DEEALKIINIFSRDNARTPFQWSGSENAGFTTGRPWLKVNENYKVINANLQIEDEESVFNFYKKLINLRKSEEFKDAIVY GEFVPTFEEYDNLFAFYRQGESKKLMILANYQKEEQIIELDKQYVKVLINNCEEIKKDKNKIILQGYQVLILEV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 4e-95 | 43 |
