Gene Information

Name : fliP (Tmel_0929)
Accession : YP_001306175.1
Strain : Thermosipho melanesiensis BI429
Genome accession: NC_009616
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : 3.1.1.3
Position : 964273 - 965028 bp
Length : 756 bp
Strand : -
Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus

DNA sequence : 
GTGAGAAAGATACTTATAATTTCCTTACTATTAGTTTCATTTTTGAGTTTTCCACAAGAAGAAATACCACTTCCTGGTAT
TTCTCTGCAAATAACTCCAAATCAACAACCAAGAGATTTAGTAAACACCCTTGAAATATTACTATTATTAACAGTCTTAT
CATTGGCTCCAAGCATCTTAATTTTGTTTACATCATTCACAAGAATTATAGTTGTATTTTCGTTCGTTAGAAATGCTCTT
GGAACAAGACAAACTCCACCAAACCAAATTTTGATTGGATTAGCGTTGTTTTTAACATTTTTTATAATGCAGCCCGTGTG
GAATGATATATATAACAACGCTATAACTCCATATTTAAATTCAGAAATAGGGTACGAGGAAATGTTTTCTAGAAGCATGG
ACAGACTGAGAACATTTATGTTAACGGAAATAAAAATACATCACAACGAAGATAACATCTACATACTAGCAGAAAATGTG
AAAAAGCAAATCGACAACATAGAAGATACACCTAATTCTATTTTAATTCCTGCTTTTGTAATAGGAGAACTTGAAATAGG
TTTCAAAATGGGGATCTTACTCTATATACCATTCATAGTAATGGATATGGTTGTTGCAAGTATTCTATTGTCCTTGGGAA
TGATAATGATTCCACCTGTTTTGGTTTCATTACCATTTAAAATACTATTATTCGTATTAGTTAACGGTTGGGACATATTA
ATAGGTAGTTTAATTAAAAGTTTTGGGGGAGGATAA

Protein sequence : 
MRKILIISLLLVSFLSFPQEEIPLPGISLQITPNQQPRDLVNTLEILLLLTVLSLAPSILILFTSFTRIIVVFSFVRNAL
GTRQTPPNQILIGLALFLTFFIMQPVWNDIYNNAITPYLNSEIGYEEMFSRSMDRLRTFMLTEIKIHHNEDNIYILAENV
KKQIDNIEDTPNSILIPAFVIGELEIGFKMGILLYIPFIVMDMVVASILLSLGMIMIPPVLVSLPFKILLFVLVNGWDIL
IGSLIKSFGGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
escR AFO66317.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 7e-28 41
escR AFO66400.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 7e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_001306175.1 flagellar biosynthesis protein FliP VFG2016 Protein 1e-41 49
fliP YP_001306175.1 flagellar biosynthesis protein FliP VFG2338 Protein 4e-41 47
fliP YP_001306175.1 flagellar biosynthesis protein FliP VFG2494 Protein 3e-41 47
fliP YP_001306175.1 flagellar biosynthesis protein FliP VFG1259 Protein 5e-45 47