|
Name : leuS (Tmel_0256) Accession : YP_001305515.1 Strain : Thermosipho melanesiensis BI429 Genome accession: NC_009616 Putative virulence/resistance : Unknown Product : leucyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0495 EC number : - Position : 258214 - 260685 bp Length : 2472 bp Strand : - Note : leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl DNA sequence : ATGAAAGAATATATTCCTGGAGAAATAGAACCTAAATGGCAAAAAGTTTGGGCGGAATCTAAAGTATTTGAAACGCCTCA GCGTTCAGACAAAAAAAAATTTTATAATTTAGTTATGTTTCCATATCCTTCAGGTACATTACATGTAGGACATGTTAAAA ATTACGTTATTGGCGATATAGTTGCAAGGTATAAAAGGATGAAAGGATATAACGTTTTGCATCCATTTGGATATGATGCA TTTGGTCTTCCTGCGGAGAATGCGGCTATAAAGAATAAGATCCATCCAGAGGTTTGGACGTTTAAGAATATAGATATAAT AAGAAATCAAATAAAAAAGATAGGAATTAGTTATGACTGGTCTAGAGAAGTAATTACTTGTACTGAGGAATATTACAAAT GGACTCAATGGATTTTTTTGAAACTTTATGAAAATGGACTTGCGTACAAAAAGAAAGCAGCGGTAAATTGGTGTCCAAGT TGTCAAACGGTGTTGGCAAACGAACAAGTTGTAGATGGTAAATGCGAAAGATGTGGTACGGAAGTAACTATGAAACATCT TGAACAATGGTATTTTAAAATTACTGATTATGCTGAAAAACTATTAAATGACATAGATAAGTTAAGAGGTTGGCCTGAAA ACGTAAAAATAATGCAAAAAAATTGGATAGGAAAAAGCACAGGTGCAGAAATAGATTTTCCTGTAGATAGACTTGATATG AAAATAAAAGTTTTTACTACAAGACCTGATACTATTTGGGGAGTAACATTCATGGCAATTGCTCCCGAGTCACCTTTAGT AGAAATGTTGGTTACTGATGAGAGAAAAGATGAACTTTCGCAATTTTTAAAGAAGGTTTCTTTGGAAGATAGGTTTAAAA GAACAAGTTTAGAGGCTGAAAAGGAAGGATTTTTCTTGGGAAGGTATGCCATTAACCCTGTAACAGGTGAAAAAATACCA ATATACGTTGCAAACTACATTTTATACGAATACGGAACAGGTGCAATAATGGCAGTTCCTGCTCATGATCAGAGGGATTT TGACTTTGCAAAAAAATATGGTATTTCTATTCGCGTAGTTATAGATAATCCAGAAGAATCAATTGATGTTGAAAAAATGG AAAAAGCATACGAAGAAGAAGGAATAATGGTCAATTCGGGACCTTTTAATGGTATGAGAAGCACTTTGGCGCTTGAGAAA ATAATAGAATATCTTGAGGAAAAAGGTATAGGAAAAAGAAGTGTACAATACAAACTAAGGGATTGGCTTATTTCAAGACA AAGGTATTGGGGTGCTCCAATTCCCATTGTATATTGTGAAAAGTGTGGTATTGTTCCTGTGCCTGAAAAGGATTTACCTG TAAAGTTACCAAAAGATGTGGAGTTTTTACCTACGGGACAATCTCCTCTTTCGTTAGATGAACAATTTTTAAATACAACA TGTCCAAAATGTGGTGGCCCCGCAAAAAGAGAAGCAGATACAATGGATACATTTGTAGATAGTTCATGGTATTATCTAAG GTATATAAATCCAAAACTTGAAGATAAACCATTTGATACAGAAGATATAAATTATTGGATGCCAGTTGATCAGTATATAG GTGGTGTTGAACACGCCGTTTTACACTTGCTATATTCGAGGTTTATTACCAAAGTTTTATATGATTTAGGGTATTTAAAA TTTGAGGAACCATTTGAAAATTTATTTACTCAAGGTATGATTTACAAAGATGGTTGGAAGATGAGTAAATCAAAAGGGAA TGTAGTTTCACCAGATGAAATGATTGAAAAGTACGGTGCAGATACGTTAAGAACTTACATACTTTTTATGGCTCCACCTG AAAAGGATGCAGAATGGAGTGATGCGGGAATAGAAGGGGTAAATAGATTTTTAAAGAGGCTTTGGAATAATATTTATTCT ATTTTACCAAGGATAAAAGATGTGAAAGTAGAAAAAATAGAATTGAAAAATAAACAAGAAAAAGATTTAAGAAGAAAATT ACATCAGTCTATTAAAAAGATTACCGAGGATATAGAAGGAGGATTCAAGTTTAACACGGCTATAGCAGGATTAATGGAAT TAAATAATAATTTGTCTGAATATTTAAATAGTGCAAAAGATTTAAATTTACCATTACTTAGAGAACTTGTGGAGAAGTTA ACACTTATTTTATCACCATTTGCGCCACATATGGCTGAGGAAATTTGGCATGATTTGGGGAATGATACACTTGTTGTTAA TGAGGAATGGCCAGCTTATGATGAAAATGCCCTTAAGGTTGATGAAGTTACAGTTATTATCCAAATTAATGGAAAGGTAA GGGGAAAAATTCAAACAAAGGTTGATGTAAGTGAAGGGGAAATAAAGAAATTGGCATTTGAAAATGCAAAAATAGCTTCT TACGTTGATGGCAGGGAAATTGTTAAAGTAATCTATGTGAAAAATAAATTACTCAATATTGTTGTAAAGTAG Protein sequence : MKEYIPGEIEPKWQKVWAESKVFETPQRSDKKKFYNLVMFPYPSGTLHVGHVKNYVIGDIVARYKRMKGYNVLHPFGYDA FGLPAENAAIKNKIHPEVWTFKNIDIIRNQIKKIGISYDWSREVITCTEEYYKWTQWIFLKLYENGLAYKKKAAVNWCPS CQTVLANEQVVDGKCERCGTEVTMKHLEQWYFKITDYAEKLLNDIDKLRGWPENVKIMQKNWIGKSTGAEIDFPVDRLDM KIKVFTTRPDTIWGVTFMAIAPESPLVEMLVTDERKDELSQFLKKVSLEDRFKRTSLEAEKEGFFLGRYAINPVTGEKIP IYVANYILYEYGTGAIMAVPAHDQRDFDFAKKYGISIRVVIDNPEESIDVEKMEKAYEEEGIMVNSGPFNGMRSTLALEK IIEYLEEKGIGKRSVQYKLRDWLISRQRYWGAPIPIVYCEKCGIVPVPEKDLPVKLPKDVEFLPTGQSPLSLDEQFLNTT CPKCGGPAKREADTMDTFVDSSWYYLRYINPKLEDKPFDTEDINYWMPVDQYIGGVEHAVLHLLYSRFITKVLYDLGYLK FEEPFENLFTQGMIYKDGWKMSKSKGNVVSPDEMIEKYGADTLRTYILFMAPPEKDAEWSDAGIEGVNRFLKRLWNNIYS ILPRIKDVKVEKIELKNKQEKDLRRKLHQSIKKITEDIEGGFKFNTAIAGLMELNNNLSEYLNSAKDLNLPLLRELVEKL TLILSPFAPHMAEEIWHDLGNDTLVVNEEWPAYDENALKVDEVTVIIQINGKVRGKIQTKVDVSEGEIKKLAFENAKIAS YVDGREIVKVIYVKNKLLNIVVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| leuS | YP_281511.2 | leucyl-tRNA synthetase | Not tested | Not named | Protein | 6e-168 | 44 |
