Gene Information

Name : Tmel_1835 (Tmel_1835)
Accession : YP_001307055.1
Strain : Thermosipho melanesiensis BI429
Genome accession: NC_009616
Putative virulence/resistance : Unknown
Product : 3-oxoacyl-(acyl-carrier-protein) reductase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 1818456 - 1819190 bp
Length : 735 bp
Strand : -
Note : TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR

DNA sequence :
ATGAGGTTAGAAGGGAAAGTATGTATAATAACAGGAGCAGGAAGTGGGATAGGAAAGGCAGCGGCACTTTTATTTTCCCA
AGAAGGAGCGAAAGTCATAGCGTGTGATGTTGTTGAGGAAAATTTAAAAAAGTTAAAAGAGGAAGATGACAGAATAGATG
TTTTTGTGTTAGATGTAACAAACAGAGAAGCAATACAAAATATGGTTGATAATGTGGTTGAAAAATATGGAAGGATAGAT
GTATTGGTGAATAACGCGGGAATAACAAGAGATGCATTGTTGCTAAAGATGAAGGAAGAAGATTGGGACGCAGTAATAAA
TGTAAACTTAAAGGGTGTGTTTAACATGACTCAGGCAATAGCACCGATAATGTTAAAGCAGGGAAAAGGAAGTATAATAA
ATACATCGTCGGTAGTAGGAGTGTATGGAAATATAGGACAGACTAATTATTCGGCAACGAAGGCTGGAATAATAGGAATG
ACAAAGACCTGGGCAAAAGAGCTAGCGAGAAAAGGAGCACAAATAAGGGTAAATGCAGTAGCGCCAGGATTTATAAAGAC
ACCGATGACGGAAAAAGTACCGGAGAGGATAATAAATGCATTAAATGAAAAAATACCATTAAAAAGGATGGGTGAAGCTG
AAGAAGTAGCAAGAGTGTATTTATTTCTAGCATCAGATGAATCTTCATATATTACTGGCCAGGTTATTGGTGTTGATGGG
GGATTAGTTATATAA

Protein sequence :
MRLEGKVCIITGAGSGIGKAAALLFSQEGAKVIACDVVEENLKKLKEEDDRIDVFVLDVTNREAIQNMVDNVVEKYGRID
VLVNNAGITRDALLLKMKEEDWDAVINVNLKGVFNMTQAIAPIMLKQGKGSIINTSSVVGVYGNIGQTNYSATKAGIIGM
TKTWAKELARKGAQIRVNAVAPGFIKTPMTEKVPERIINALNEKIPLKRMGEAEEVARVYLFLASDESSYITGQVIGVDG
GLVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 6e-35 42
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 5e-35 42
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 2e-34 42
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 2e-34 42
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 1e-34 42