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Name : Tmel_1286 (Tmel_1286) Accession : YP_001306520.1 Strain : Thermosipho melanesiensis BI429 Genome accession: NC_009616 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 1295324 - 1297108 bp Length : 1785 bp Strand : + Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain DNA sequence : TTGAACAGGAAATTTTTATTGTTCTTAGTAGATATATTTTCTACGTTTTTAGCGGGAATATTATCTCTATTTGTTAGGTT TGGTTTTAATTTTAGAGAAATGAGTAAATATGATGAATCTATATATATATACATTCTCATTTCCTCAATCGTATATATCT TTAATGGGAATTATAAGATAGTTTGGAGATATGCTAATCAAAAAGATTTTTTAAAGCTTTTCAGGTCGTCAATAATTTCT TACTTTTTAGTTCTTACATTTTTCCATTTTGCAAACAATATTGTTTTACCTAGATCCGTTGGATTTGTAATGTTTTTATC TTCTTTTACTATTTTAGTTGGGGTGAGGTTATTTTACCAATTTATTTTGGAAAATAGAAGAAATTCGGAAAGAAGGTATT TGATAATTGGAAGTGGTGATGTTGCAGTTTCAATTGCTGAAGAAATAATTAAATCTGGTTTAGGTGATGTTGTAGGTTTT ATAGGTGATGATGCGAGTAAAATAGGGCGTACAATCTTTGGAAAAAAGGTTTTAGGCCCATTGATAAAATTAGAGGATTA TTTAAAATTGTTTGATTATGATGAAGTTATTATTGCGCAGCCAAATTTAAATAGTAAGCAAATAAATGATATTATTGAGA AAGTAAATTTGAAGAGAACAAAGGTTAAAGTAATTCCATCATTTGAAGAATTATTTAAGGAGAAAATTGGTATAGAAGAT ATAAGGGAAATTTCATTGGAGGATATTATAGGAAGAGAACCTGTAAAAGTAAGTTTAAATGATATAAAAGAATGTATTAA GGACAGAGTTGTCTTAGTTACGGGAGCAGGTGGAAGTATTGGCTCTGAAATATGTAGACAGATTGCTTTTCAAAAACCAA AAGAGTTATTATTACTTGGCAGGGGAGAAAATAGTATTTACGAAATTAATGAAGAATTAAATGAAAAATTTCCTGACTTA AAAGTTTCAAGAATCATTGCCGATGTGGAAAATTATAAGTGGATGGAAGAAATTTTTAAGAGATATAAGCCAGAAATTGT TTTTCATACAGCTGCTCATAAACATGTTCCACTTATGGAAGAAAATCCCTATGAGGCTATAAGAGTTAATGTTTTTGGTA CTATTAATTTGGTTAAACTTTCATGTGTTTTTAATGTTGAAAAATTTGTTTTCATATCAACAGATAAAGCGGTGAATCCC ACGTCTTTTATGGGGTTAAGTAAAAGAATTTCCGAACTGTATGTACTATCAAAAAAGTGTAGTACAAGGTTTTCTATCGT AAGATTTGGAAATGTTATTGGAAGTAGAGGCAGCGTGCTATGGAAATTTAAAAAACAAATTGAGAATGGGAAACCTGTTA CAATTACTCATCCCGAGATGAAAAGGTATTTTATGAGTATTCCAGAAGCAGTTTCTTTGGTTTTGCAATCTATAGTACTA AATGGTAATTTATTTGTTTTGGATATGGGGAAACAAATTAGTGTTGAACAGATTGCAGGAAAACTGGCAAAACTTCTTGG TAAGGAAGATATCGATGTGGTGTATACAGGAATTAGAGGAGGTGAAAAACTGTATGAAGAATTGTTTTATCCTTATGAAA TACCTAAAAATACGGAACATCCAAAGATTTATTCTGTGGATTTTAGGCCAAATATTAGTGAAAACGAAATTGAATATATT TCTAAAGAAATACTGGAAAGTTTAATGCATTTTAATATAGAAAAAGCTGAAATGCTGGCGAAAAAAATAGTACCAGAATT TAAATTTAGAGGAGGAGTAAAATGA Protein sequence : MNRKFLLFLVDIFSTFLAGILSLFVRFGFNFREMSKYDESIYIYILISSIVYIFNGNYKIVWRYANQKDFLKLFRSSIIS YFLVLTFFHFANNIVLPRSVGFVMFLSSFTILVGVRLFYQFILENRRNSERRYLIIGSGDVAVSIAEEIIKSGLGDVVGF IGDDASKIGRTIFGKKVLGPLIKLEDYLKLFDYDEVIIAQPNLNSKQINDIIEKVNLKRTKVKVIPSFEELFKEKIGIED IREISLEDIIGREPVKVSLNDIKECIKDRVVLVTGAGGSIGSEICRQIAFQKPKELLLLGRGENSIYEINEELNEKFPDL KVSRIIADVENYKWMEEIFKRYKPEIVFHTAAHKHVPLMEENPYEAIRVNVFGTINLVKLSCVFNVEKFVFISTDKAVNP TSFMGLSKRISELYVLSKKCSTRFSIVRFGNVIGSRGSVLWKFKKQIENGKPVTITHPEMKRYFMSIPEAVSLVLQSIVL NGNLFVLDMGKQISVEQIAGKLAKLLGKEDIDVVYTGIRGGEKLYEELFYPYEIPKNTEHPKIYSVDFRPNISENEIEYI SKEILESLMHFNIEKAEMLAKKIVPEFKFRGGVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 6e-71 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Tmel_1286 | YP_001306520.1 | polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 1e-71 | 41 |
