Name : BDI_0539 (BDI_0539) Accession : YP_001301937.1 Strain : Parabacteroides distasonis ATCC 8503 Genome accession: NC_009615 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 640095 - 641369 bp Length : 1275 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTGACAATCAAATTAATCACTGAAAACACGGATGCCGTAATCCGTGGACTGGAAAAGAAACATTTTAAGGGTGCGAA AGAAAGCATCGATAAAGTGTTGGAATTGAATGATAAAAGACGTATCGCACAAAATCAATTAGATAAGAACCTAGCGGAGG TAAACGCAACCTCGAAGTCGATCGGACAATTAATGAAAGAGGGCAAGAAGGAAGAGGCGGAGGCCGCTAAGAAACATGTT TCCGAGATCAAGGAGGTGAGCAAGGCTTTGCAGGTTGAGATGGATCAGGCTGCCGAGGAGCTGCAGAACTTACTTTATAC GATCCCGAACGTACCTTATGATGAGGTACCCGAGGGTATCTCTGCGGAGGACAATGTGGTAGAGAAAATGGGAGGTATGG AAACGGAACTTCCGAAGAACGCTCTTCCGCACTGGGAATTGGCGAAGAAATATGATTTGATTGATTTCGATCTGGGTGTT AAGATCACGGGAGCAGGTTTCCCGGTCTATAAAGGACAGGGCGCTCGTTTGCAACGTGCGTTGATCAACTTCTTCTTGGA TGAGGCCCGTGACGCCGGTTACTTGGAGATCATGCCGCCTACGGTGGTGAACTCGGCTTCCGGTTATGGTACGGGACAGC TTCCAGATAAGGAGGGACAGATGTATCATTGCGAGGTAGACGACCTCTATTTGATCCCGACAGCGGAGGTGCCCGTGACA AATATTTACCGGGATGTCATTCTGGATGAGAAGCAGTTACCGATCAAGAATTGCGCTTATACACAATGCTTCCGTCGTGA GGCCGGATCTTATGGCAAGGATGTACGTGGTTTGAATCGTTTGCACGAATTTTCTAAGGTGGAGTTGGTTCGGATCGATA AACCGGAGCACTCTAAGCAATCTCACCAAGAGATGTTGAATCATGTGGAGGGATTACTTCAGAAGTTGGAGTTGCCGTAT CGCATCCTTCGTCTTTGTGGGGGTGATATGAGTTTCACGGCTGCCCTTTGCTTTGACTTCGAGGTGTATTCCGAGGCACA ACAACGCTGGTTGGAAGTTAGCTCCGTGTCCAACTTCGATACGTATCAAGCCAACCGCTTGAAATGCCGCTATCGTGACG AGAATAAGAAAACGCAACTTTGCCATACCTTGAATGGTAGTGCCTTGGCTTTACCTCGCATCGTAGCCGCCTTATTGGAA AACAACCAAACCCCCGAGGGCATCCGCATCCCGAAAGCGTTGATCCCTTACACTGGGTTTGATATGATTAAATAA Protein sequence : MLTIKLITENTDAVIRGLEKKHFKGAKESIDKVLELNDKRRIAQNQLDKNLAEVNATSKSIGQLMKEGKKEEAEAAKKHV SEIKEVSKALQVEMDQAAEELQNLLYTIPNVPYDEVPEGISAEDNVVEKMGGMETELPKNALPHWELAKKYDLIDFDLGV KITGAGFPVYKGQGARLQRALINFFLDEARDAGYLEIMPPTVVNSASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPVT NIYRDVILDEKQLPIKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSKQSHQEMLNHVEGLLQKLELPY RILRLCGGDMSFTAALCFDFEVYSEAQQRWLEVSSVSNFDTYQANRLKCRYRDENKKTQLCHTLNGSALALPRIVAALLE NNQTPEGIRIPKALIPYTGFDMIK |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-64 | 43 |