Gene Information

Name : BDI_0026 (BDI_0026)
Accession : YP_001301443.1
Strain : Parabacteroides distasonis ATCC 8503
Genome accession: NC_009615
Putative virulence/resistance : Virulence
Product : nucleoside-diphosphate-sugar epimerase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : -
Position : 24475 - 25449 bp
Length : 975 bp
Strand : +
Note : -

DNA sequence : 
ATGAATAAGATTTTGGTTACTGGAGGAGCCGGGTTTATTGGTTCTAATCTTTGTGAGCATTTGTTGGCTCACAACTATGA
AGTGGTATGTTTAGACAATTTTGCCACCGGTAAGCCAGAGAATGTGTTCCCGCTTTTAGAACGCTATTCTGAAAAGTTTA
AATTGATAGTCGGTGATATCCGGGTTTTGGCAGATTGTCGCAAAGCAGTGGAGGGTGTGGATTACGTTATGCACGAAGCC
GCATTGGGAAGCGTACCTCGTTCTATCAAAGATCCGATTACTACGAACGACACCAATATATCCGGATTCTTGAATATGCT
GGTAACCGCCCGAGATGCAGGTGTGAAACGATTTATATATGCTGCAAGTTCGTCTACTTATGGCGACAGCAAGTCACTAC
CGAAGGTCGAGGATGTGATAGGAAAGCCACTATCTCCTTATGCCATTACCAAGTATGTGAACGAACTCTATGCCGATGTG
TTTGCCAAAACATACGGTATGGAATGCATCGGACTGCGCTATTTCAATGTGTTCGGGCGTCGTCAGGATCCGTTTGGCGC
ATACGCCGCTGTGATTCCATTGTTTGTGAAGAAACTGATGGCTCATGAAAGTCCGGTTATTAATGGTGATGGTGAATACA
GCCGCGATTTCACTTATATAGACAATGTGGTTCAGATGAATATGCTGGCTATGACCACCAATAATAAGAATGCTGTAAAT
CAGATATATAACACAGCCTACGGTGAACGCACCACATTGAACCAACTTGTAGGCTATCTGAAAGAATTTTTGAGCGAGTT
TGATTCTGAGATTATTCAAGTGGAAGTGATTCATGGTCCTAACCGTTTAGGAGATATACCCCATTCTCTGGCTTGTATTG
ACAAAGCCAAATCGTTATTGGGCTATAATCCGCAATACAGTATGCGCGAGGGGTTGAAAGAAGCTGTGAAATGGTATTGG
AATAATTTGATATAA

Protein sequence : 
MNKILVTGGAGFIGSNLCEHLLAHNYEVVCLDNFATGKPENVFPLLERYSEKFKLIVGDIRVLADCRKAVEGVDYVMHEA
ALGSVPRSIKDPITTNDTNISGFLNMLVTARDAGVKRFIYAASSSTYGDSKSLPKVEDVIGKPLSPYAITKYVNELYADV
FAKTYGMECIGLRYFNVFGRRQDPFGAYAAVIPLFVKKLMAHESPVINGDGEYSRDFTYIDNVVQMNMLAMTTNNKNAVN
QIYNTAYGERTTLNQLVGYLKEFLSEFDSEIIQVEVIHGPNRLGDIPHSLACIDKAKSLLGYNPQYSMREGLKEAVKWYW
NNLI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 3e-75 56
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 3e-75 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BDI_0026 YP_001301443.1 nucleoside-diphosphate-sugar epimerase VFG0430 Protein 1e-75 56