|
Name : BVU_3638 (BVU_3638) Accession : YP_001300871.1 Strain : Bacteroides vulgatus ATCC 8482 Genome accession: NC_009614 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 4503778 - 4505052 bp Length : 1275 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTTACCATTAAACAAATTACAGAGAATACGGAAGAGGTAATCCGCGGACTGGAAAAGAAGCATTTTAAAGATGCAAA AGCAACGATAGAACAAGTGCTTGCATTCAATGACAAAAGACGTAGCACGCAGAATCAATTAGATAAAAACCTGGCAGAAG TGAACTCGCTCTCCAAATCTATCGGGCAACTGATGAAAGAAGGGAAAAAAGAAGATGCTGAAACAGCTAAAGCACGTGTA GCCGAAATCAAAGAAACCAGCAAAGCTTTACAAGCAGAAATGGACAAAGCACAGGAAGACATGACCAACCTGCTTTACAC CATTCCCAATGTTCCTTATGACAGTGTGCCCGAAGGTGTAAGCGCTGAAGACAATGTGGTGGAAAAAATGGGCGGTATGG AAACCGAACTCCCCAAGAATGCGCTTCCCCATTGGGAACTTGCCAAAAAATACGACTTGATAGATTTTGACCTGGGCGTG AAAATCACAGGGGCAGGTTTTCCTGTATATAAAGGTAAAGGGGCACGTCTTCAACGCGCATTAATCAATTTCTTCCTGGA TGAAGCCCGCGCTTCCGGTTACGAAGAAATCATGCCACCGACGGTAGTAAACACCGCATCGGGCTACGGAACAGGACAAC TTCCCGACAAAGAAGGACAAATGTATCATTGTGAAGTAGATGATTTGTACTTGATTCCAACCGCAGAAGTTCCTGTAACC AATATCTATCGTGACGTGATTTTGGACGAAAAACAATTGCCTATCAAGAATTGCGCATATACTCAATGTTTCCGTCGTGA AGCCGGATCTTACGGCAAAGACGTACGTGGGTTGAACCGTTTGCACGAATTCTCAAAAGTAGAACTGGTACGCATTGACA AACCCGAACATTCCAAACAGTCACATCAGGAAATGTTGGACCATGTAGAAGGCCTGTTGAAGAAATTAGAACTCCCCTAT CGCATTCTCCGCCTTTGCGGTGGTGATATGAGTTTTACAGCTGCACTTTGCTTTGACTTTGAGGTTTATTCGGAAGCACA ACAGCGTTGGCTGGAAGTAAGTTCTGTATCCAATTTCGATACGTATCAGGCTAATCGCCTGAAATGCCGTTACCGTTCTG CCGAAAAGAAAACAGAATTATGCCATACTTTGAACGGTTCCGCACTGGCTTTGCCGCGTATTGTTGCAGCCTTATTAGAA AATAATCAGACTCCGGAAGGTATCCGTATCCCTAAAGCATTAGTTCCTTATTGCGGATTCGAGATGATTGACTAA Protein sequence : MLTIKQITENTEEVIRGLEKKHFKDAKATIEQVLAFNDKRRSTQNQLDKNLAEVNSLSKSIGQLMKEGKKEDAETAKARV AEIKETSKALQAEMDKAQEDMTNLLYTIPNVPYDSVPEGVSAEDNVVEKMGGMETELPKNALPHWELAKKYDLIDFDLGV KITGAGFPVYKGKGARLQRALINFFLDEARASGYEEIMPPTVVNTASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPVT NIYRDVILDEKQLPIKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSKQSHQEMLDHVEGLLKKLELPY RILRLCGGDMSFTAALCFDFEVYSEAQQRWLEVSSVSNFDTYQANRLKCRYRSAEKKTELCHTLNGSALALPRIVAALLE NNQTPEGIRIPKALVPYCGFEMID |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 8e-67 | 43 |
