Gene Information

Name : BVU_3413 (BVU_3413)
Accession : YP_001300661.1
Strain : Bacteroides vulgatus ATCC 8482
Genome accession: NC_009614
Putative virulence/resistance : Virulence
Product : type I restriction-modification system M subunit
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0286
EC number : -
Position : 4257976 - 4260291 bp
Length : 2316 bp
Strand : -
Note : -

DNA sequence :
ATGGAGCAACTGATAGCCCTTATATGGAATATAGCAGACGATGTGCTGCGTGATGTGTTTCTTCGCGGTCAATACCGTGA
TGTAATTCTTCCTATGGTTGTACTGCGACGTCTCGATGCTTTGTTGGAACCTACCAAAGTAGCTGTAGAGCAAGAATACA
AAAGTCAGATTGAGGCTGGACTTGCAGATAATTTAGATGAGGAAGCCCTTAAAGATGAGTCGGGACAAACGTATTACAAC
CTATCAAAGTGGACACTCAATCGACTGAAAAATCAATCCTCAGATAATAATGACATCAACTATACCAATTTCATTGAATA
TCTGAATGGCTATAGTGAGAATGTCAAGGATGTATTGAAGAACTTTGAGTTTTATGCGAAGGTTAAGAAATTGGCCGATA
ATGACCGATTGATTTCAATCATAGAACGCATTACGGACCCCCGTTTGAATCTTACCGACCGTCCTGCAACCGACCCCGAC
GGCTTACCGCTTCCGGCTGTGTCTAATCTTCAAATGGGTACGTTGTTTGAAGAACTGCTCCGCCGATTCAATGAAGAAAA
TAATGAGGAAGCAGGTGAGCACTTCACGCCCCGTGATGTGATTGAACTGTTGGCTAAGATGGTATTTGAACCCGTAAAAG
ATAATCTCCCTAAAATTATTTCACTCTATGATCCTGCTTGTGGTTCGGGCGGTATGCTTACAGAAGGCCGTGACTACTTA
CTCAACATGGGCGTAACTCCAAATGCCATTCAGATGTATGGCACAGAGGTCAACCCTGAAACTTATGCTATTTGTAAGAG
TGACTTTATCATTAAAGGAGTAGATCCTGAAGGTATGCACCGTGGTAACACAATCACTGAGAACCATTTCCATAATAAGC
AGTTTGGTTATATGCTTACCAATCCACCTTATGGCAAATCGTGGAAAGAGGACAAGAAAAAAATCTATCATGATAAGGAT
CTGCTTGATGCACGCTTCAACTTGAAATTGACTAATTTCATTGGTGAAGAAGAAATTGTGGATTCTACGCCGCGCACCAG
TGATGGACAACTTCTGTTTATTCTCGAAGAAGTGGATAAAATGAAGTCACTGGAAGCACAACCACAAGGTTCAAGAGTGG
CTTCCATTCACAATGGCTCATCTCTGTTTACAGGCGATGCTGGCTCGGGTGAATCTAATATCCGTCGCTACTATCTTATT
GAGAATAATTTGGTGGATGCAATTGTGCAGTTGCCTAATAATATTTTCTACAACACCGGTATCAGTACCTATGTGTGGCT
GCTGAGCAATCACAAACAAGACCACAAGGTGCAACTCATTGATGCTTCGAAAGCTTTCGACAAATTGCGCAAGAATCTAG
GTAGCCGTAACTGCGAGGTAACGCCTAAGGATGCAGATGATATTGTACGTATTTACATGAATCGCACTGAATGTGAGGCA
AATGATGACGTACGCATTTCGAGCAAGATTTTTGATGGCGACGACTTCCGCTATTACAGCGTACAAATTGAGCGTCCGCT
ACGCTTACGTTGCCGTTTCTCTGCCGTTAAGTGCGATGAACTGCTTTTTGATTCTTCCATGATGGAACTTTCGAAATGGC
TTTACCAAACGTATGGAGATAAGGTGTATAGCGGTCTCGAAGCAGAGGTGACTGATATTAAAGAATATCTCAATGAGAAC
GAGCTAAAGCTAACAGACAAGAAGTTTACCACCTTGGTGAGTGCCAAGAAATGGCAAGAGCGTCGTGCCCTGCAACAGGC
TGCAATGAAGCTCATGCACAAAGTAGGCACGGCTGAATACGATGACTACAACCTTTTCCTTGCGCTAAACCAAAAGGCGA
TCAAGGAGCTAGGATTAAAGCTAACTGCCGCCCAGTTGAAAACCATCTTGCGTACCAATGCAGTACAAGATCCAACTGCA
AAGCCTGTCATTGCCAAAGTGCTCAAGGCAAAGAATAAGGACATTCCTGCTTTTTTGGCTACTTACGGCATAGATGAAAG
TCTTTTGCCCGATTATGGCTATTACCCACAAACGGATGGTACTTATGTGACCTACGAAGCTGACAGTGATTTGCGTGACA
TTGAAAAAATTCCTGTTAAGGAGGATATTTGGGAGTATGTGCAGCGTGAGGTAAATCCTTATGTGTCAGAAGCGTGGATT
AACCTTCCTGTCACCAAGATTGGATGCGAGATTTCGTTTAACAAGTACTTTTATAAGCCTGCTCAACTTCGCTCTTTGGA
AGAGAATGAACATGATATTCTGGAGTTAGATCGCCAGAGTCAAGGGTTTATCGAAGCATTGCTTAAATTGATGTAG

Protein sequence :
MEQLIALIWNIADDVLRDVFLRGQYRDVILPMVVLRRLDALLEPTKVAVEQEYKSQIEAGLADNLDEEALKDESGQTYYN
LSKWTLNRLKNQSSDNNDINYTNFIEYLNGYSENVKDVLKNFEFYAKVKKLADNDRLISIIERITDPRLNLTDRPATDPD
GLPLPAVSNLQMGTLFEELLRRFNEENNEEAGEHFTPRDVIELLAKMVFEPVKDNLPKIISLYDPACGSGGMLTEGRDYL
LNMGVTPNAIQMYGTEVNPETYAICKSDFIIKGVDPEGMHRGNTITENHFHNKQFGYMLTNPPYGKSWKEDKKKIYHDKD
LLDARFNLKLTNFIGEEEIVDSTPRTSDGQLLFILEEVDKMKSLEAQPQGSRVASIHNGSSLFTGDAGSGESNIRRYYLI
ENNLVDAIVQLPNNIFYNTGISTYVWLLSNHKQDHKVQLIDASKAFDKLRKNLGSRNCEVTPKDADDIVRIYMNRTECEA
NDDVRISSKIFDGDDFRYYSVQIERPLRLRCRFSAVKCDELLFDSSMMELSKWLYQTYGDKVYSGLEAEVTDIKEYLNEN
ELKLTDKKFTTLVSAKKWQERRALQQAAMKLMHKVGTAEYDDYNLFLALNQKAIKELGLKLTAAQLKTILRTNAVQDPTA
KPVIAKVLKAKNKDIPAFLATYGIDESLLPDYGYYPQTDGTYVTYEADSDLRDIEKIPVKEDIWEYVQREVNPYVSEAWI
NLPVTKIGCEISFNKYFYKPAQLRSLEENEHDILELDRQSQGFIEALLKLM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1769 NP_231404.1 DNA methylase HsdM Not tested VPI-2 Protein 3e-173 49
VC0395_A1367 YP_001217310.1 DNA methylase HsdM Not tested VPI-2 Protein 3e-173 49
VPI2_0017c ACA01834.1 DNA methylase HsdM Not tested VPI-2 Protein 6e-174 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BVU_3413 YP_001300661.1 type I restriction-modification system M subunit VFG1102 Protein 1e-173 49