Gene Information

Name : ibrB (FP0801)
Accession : YP_001295717.1
Strain : Flavobacterium psychrophilum JIP02/86
Genome accession: NC_009613
Putative virulence/resistance : Virulence
Product : Protein of unknown function IbrB
Function : -
COG functional category : K : Transcription
COG ID : COG1475
EC number : -
Position : 1008964 - 1009512 bp
Length : 549 bp
Strand : -
Note : -

DNA sequence :
ATGAGTAAAAAATTTAAGAGCCCAGTTTATAATGTGATAGCTGTGCCAATGGACAAAATTGAAGCGAATGATTACAATCC
TAATCATGTTGCTAAAAGAGAAATGGATCTATTGTATCAATCAATAAAAGCAGATGGTTATACTATGCCAGTTGTAGCTT
TTTACGACCAAGAAAGAGATAAGTATATCATTGTGGATGGGTTTCACCGTTATACAATAATGCTTACTCGAAAAGATATT
TTTGAGCGTGAAAATGGTATGTTACCCGTCTCTGTAATTGAAAAAGATATTTCAGACCGCATGGCTTCGACAATTCGCCA
CAACCGAGCGAGAGGAAAACACGAAGTAGAACTACAAGCTTCATTAGTTGGAATGCTAAAGTCGGGTTGGGATGAAATCA
AGATTATGAAGGAATTAGGAATGACTCTCGAAGAAGTACAGCGACTAATCGGATTGAAAGGAATTGCATCCGAAATTCAA
GGAATACCATATTCTATCGAAAGACAAATCAAAGAAGTAGAAGAAGATATTAATCCAGAATTTAATTAA

Protein sequence :
MSKKFKSPVYNVIAVPMDKIEANDYNPNHVAKREMDLLYQSIKADGYTMPVVAFYDQERDKYIIVDGFHRYTIMLTRKDI
FERENGMLPVSVIEKDISDRMASTIRHNRARGKHEVELQASLVGMLKSGWDEIKIMKELGMTLEEVQRLIGLKGIASEIQ
GIPYSIERQIKEVEEDINPEFN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
M5005_Spy_0164 YP_281528.1 parB-like nuclease Not tested Not named Protein 8e-41 53
ef0120 AAM75321.1 EF0120 Not tested Not named Protein 3e-32 51
EF0607 NP_814365.1 ParB-like nuclease domain-containing protein Not tested Not named Protein 5e-32 51
APECO1_3503 YP_854305.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-16 45
c5208 NP_757056.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-16 45
ORF_30 AAZ04440.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-16 45
Z1644 AAQ19140.1 putative ParB-like nuclease Not tested PAI I CL3 Protein 1e-20 41
ibrB ADD91736.1 predicted transcriptional regulator IbrB Not tested PAI-I AL862 Protein 1e-20 41
z1204 CAD33764.1 Z1204 protein Not tested PAI I 536 Protein 1e-22 41
Z1204 NP_286739.1 hypothetical protein Not tested TAI Protein 3e-20 41
Z1644 NP_287147.1 hypothetical protein Not tested TAI Protein 3e-20 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ibrB YP_001295717.1 Protein of unknown function IbrB VFG1505 Protein 4e-23 41