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Name : serS (FP0072) Accession : YP_001295012.1 Strain : Flavobacterium psychrophilum JIP02/86 Genome accession: NC_009613 Putative virulence/resistance : Unknown Product : Serine--tRNA ligase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 104942 - 106213 bp Length : 1272 bp Strand : - Note : - DNA sequence : ATGTTACAAATCGCATTTATTAGAGAAAATCAGGAAAAAGTAATCAAAGCTTTGGCAAAAAGAAGCATCGATGCTACCAG TATTGTTCAAGAAGTGGTACAAATAGACGAAAAACGTCGTGCCACACAAGTAGAATTAGATACTATTTTATCCGAATCTA ATAGCATATCAAAAGAAATTGGCGATTTGATGAAAAGCGGCGAAAAAGAAAAAGCGACCGCTCTAAAAGAAAAAATTGCT ACAAACAAAGAAAAAACCAAAGAACTCTCTGAAATTACAGAAACTTTAGCAAAAGATTTATTAGACAAACTATATACCTT ACCTAATCTTCCCGCAGATATTGTCCCTGAAGGAAAAACACCCGAAGAAAACCTAAACATTTTCCAGGAAGGTGACATTC CTGTTTTGCACGAAGAAGCACAACCACATTGGGAATTGATAAAAAAATACGACATTGTCGATTTCGAATTAGGAACAAAA ATTACAGCACCAGGATTTCCTGTTTATAAAGGAAAAGGAGCAAAATTACAACGTGCGCTTATTTCTTATTTTTTAGATAA AAATACCGATGCGGGGTACCAAGAATACCAAGTACCACACATGGTAAACGAAGCATCGGCCTACGGAACTGGGCAATTGC CAGACAAAGAAGGACAAATGTACCACGATGCAAAAGACAACTTATATCTTATTCCAACTGCCGAAGTTCCTGTAACCAAC ATTTTTAGAGATGTTATTCTTAACGAAAACGAATTACCCGTTTTATGCACAGGTTATACGCCTTGTTTTCGTCGTGAAGC AGGATCATGGGGTGCTCACGTGCGTGGACTAAACCGTTTGCACCAATTTGATAAAGTAGAAATCGTACGAATCGAACATC CTGACAAATCGTATGAAGCACTAGAAGGAATGGTAGAACACGTGAAAAGCATTTTGCAAGAACTAAAATTACCATACAGA ATACTTCGTCTTTGTGGCGGAGACATGGGTTTTGCATCGGCATTAACTTATGATTTTGAGGTTTTTAGCACAGCACAAGA TCGTTGGTTAGAAATTTCGTCTGTATCTAATTTCGAAACTTTTCAATCTAATAGATTAAAATTACGTTTCAAAGATAAAG AAGGTAAAAACCAATTGGCACATACCTTAAACGGAAGTTCTCTTGCTTTACCAAGAGTATTGGCAGGAATTTTAGAAAAT TATCAAACACCAGAAGGAATAGTAATTCCTGAAGTACTTAGAAAATATACAGGTTTTGATATCATCAACTAA Protein sequence : MLQIAFIRENQEKVIKALAKRSIDATSIVQEVVQIDEKRRATQVELDTILSESNSISKEIGDLMKSGEKEKATALKEKIA TNKEKTKELSEITETLAKDLLDKLYTLPNLPADIVPEGKTPEENLNIFQEGDIPVLHEEAQPHWELIKKYDIVDFELGTK ITAPGFPVYKGKGAKLQRALISYFLDKNTDAGYQEYQVPHMVNEASAYGTGQLPDKEGQMYHDAKDNLYLIPTAEVPVTN IFRDVILNENELPVLCTGYTPCFRREAGSWGAHVRGLNRLHQFDKVEIVRIEHPDKSYEALEGMVEHVKSILQELKLPYR ILRLCGGDMGFASALTYDFEVFSTAQDRWLEISSVSNFETFQSNRLKLRFKDKEGKNQLAHTLNGSSLALPRVLAGILEN YQTPEGIVIPEVLRKYTGFDIIN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 5e-74 | 45 |
