|
Name : FP2485 (FP2485) Accession : YP_001297339.1 Strain : Flavobacterium psychrophilum JIP02/86 Genome accession: NC_009613 Putative virulence/resistance : Unknown Product : Putative RNA binding protein with S1 RNA-binding domain Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 2855797 - 2857953 bp Length : 2157 bp Strand : - Note : - DNA sequence : ATGACCAACATACAATTTATAGCAAAACAAGTAGCTACCACACCAAAAAATATAGAATCTACTGTAAAATTATTAAATGA AGATTGTACAATTCCTTTTATTTCTCGTTACCGAAAAGACACCACAGGAAATCTCGATGAGGTTTTTATCGAGCAAATTG CCAAGTTAAACAAAGAATATGATCTTATTGTAAAACGAAAAGAAGGTATTTTAAAATCGATAGAAGAGCAAAAAGCACTA ACACCAGAATTGAAACAAAAAATCGATAATTCTTTCGATTTACAAGAAATAGAAGATTTTTATTTGCCTTACAAAAAGAA AAAGAAAACCAAGGCCGATGTAGCTCGTGAAAACGGATTAGAACCACTAGCTAAAATCATCATGAATCAGAAAAATGATG CTGTCGATTTCTTAGCAACCCAATATTTGAACAGTAATGTGATTAATGAAGAGGCTGCTTTGCAAGGCGCACGAGATATT ATCGCCGAATGGGTTAACGAAAACATCTATGTTCGCAAGCAACTTAGAAGACTTTATGAGCGCAAAGCAACCATTACGAC TAAAGTTGTTAAAAAGAAAGAAGAAGAAGAAGCGGCACAAAAATTTAACCAATATTTCGAATGGAGTGAGAATTTAACCA AAGCCGCTTCACACAGATTATTAGCCATGCTTCGGGCAGAAAAGGAAGGATTTGTTAAAATAAAAATAGAAGTAGATCTC GATGAAGCTTATGATTTAATTGATGAAATTATCATCAAAAACACTAACAGTGCTGCCATTTCTCATGTACAATTGGCCAT TGAAGACAGTTACAAAAGATTACTCACTCCTGCCATTTCGAACGAAGCTTTACAAGAGGCCAAAGCCAAAGCCGATGCCA ATTCTATTCAGGTTTTTGCCAATAATTTAGGGCAACTTTTATTAGCACCACCATTAGGAGAAAAACGAATTCTAGCCATC GATCCCGGATTTCGTTCGGGTTGTAAGATTGTTTGTCTGGACGAAAAAGGCGATTTATTATACAACGAAACCATTTATCC GCACGCCCCACAAAACGAAACTGCGATGGCGATGAAAAAGATAAAATCGATGGTCAATGCTTATAATATAGATGCTATTT CTATAGGAAACGGAACAGCGAGTCGAGAAACCGAATTTTTCATCAAAAAAATTGCTTTCGAAACTCGAGCCGTAGGCGAA CAAGGCGAAGCCAAACCCGTTCAAGTATTTATCGTATCTGAGGCAGGTGCCTCGGTATATTCGGCATCAAAAATTGCGAG AGACGAATTTCCTAATTACGACGTTACCGTTCGTGGTTCGGTTTCCATCGGAAGAAGATTATCGGATCCGTTGGCAGAAT TAGTAAAAATAGATCCCAAAGCTATTGGCGTAGGGCAATACCAACACGATGTAGACCAAACAAAATTAAAAGAAGAGCTA GATAATACGGTCATTCGATGCGTAAATTCGGTAGGAATAAACATTAATACCGCCAGCAAACATTTGCTGAGTTATGTATC TGGAATAGGGGAGAAATTAGCCGAAAATATTGTGCAATACCGCTCAGAAAACGGACCATTTGAAAACAGAAAACAATTAA AGAAAGTACCTCGTTTGGGGGAAAAAGCTTACCAACAAGGTGTGGCTTTTATTAGAATTCACAATGCCAAAAACCCGTTA GACAATTCGGCAGTGCATCCTGAAGCCTACGCAATTGTAGAAAAAATGGCAAAAGATTTGAAGTTATCTGTACATGATTT AATTGCCAACAAAGAAAAAACGGCTTTAATAAAACCGGAGCATTATATCACGCCCGAAATAGGTTTATTAACCCTAAAAG ACATTATAAAAGAACTCGAAAAACCAGGTTTAGACCCGAGAAAATCGGCCAAAGCTTTCGAATTTGACCCTAATGTAAAA ACCATAAAAGACCTTCGAACTGGCATGATTTTACCAGGAATTGTAAACAATATTACCAATTTTGGTTGTTTTGTCGATAT TGGTACTAAAGAAAGTGGCTTGGTTCACATTTCGCAACTTAAAGCAGGTTTTGTGAGTGATGTAAATGAAGTAGTCAAGT TGCACCAACACGTTACCGTAAAAGTCACTGAGGTTGATGAAGATAGAAAACGAATTCAATTGACGATGATTTTATAA Protein sequence : MTNIQFIAKQVATTPKNIESTVKLLNEDCTIPFISRYRKDTTGNLDEVFIEQIAKLNKEYDLIVKRKEGILKSIEEQKAL TPELKQKIDNSFDLQEIEDFYLPYKKKKKTKADVARENGLEPLAKIIMNQKNDAVDFLATQYLNSNVINEEAALQGARDI IAEWVNENIYVRKQLRRLYERKATITTKVVKKKEEEEAAQKFNQYFEWSENLTKAASHRLLAMLRAEKEGFVKIKIEVDL DEAYDLIDEIIIKNTNSAAISHVQLAIEDSYKRLLTPAISNEALQEAKAKADANSIQVFANNLGQLLLAPPLGEKRILAI DPGFRSGCKIVCLDEKGDLLYNETIYPHAPQNETAMAMKKIKSMVNAYNIDAISIGNGTASRETEFFIKKIAFETRAVGE QGEAKPVQVFIVSEAGASVYSASKIARDEFPNYDVTVRGSVSIGRRLSDPLAELVKIDPKAIGVGQYQHDVDQTKLKEEL DNTVIRCVNSVGININTASKHLLSYVSGIGEKLAENIVQYRSENGPFENRKQLKKVPRLGEKAYQQGVAFIRIHNAKNPL DNSAVHPEAYAIVEKMAKDLKLSVHDLIANKEKTALIKPEHYITPEIGLLTLKDIIKELEKPGLDPRKSAKAFEFDPNVK TIKDLRTGMILPGIVNNITNFGCFVDIGTKESGLVHISQLKAGFVSDVNEVVKLHQHVTVKVTEVDEDRKRIQLTMIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 9e-136 | 44 |
