Gene Information

Name : neuB (FP1256)
Accession : YP_001296150.1
Strain : Flavobacterium psychrophilum JIP02/86
Genome accession: NC_009613
Putative virulence/resistance : Virulence
Product : Sialic acid synthase (N-acetylneuraminic acid synthetase)
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2089
EC number : -
Position : 2370764 - 2371804 bp
Length : 1041 bp
Strand : -
Note : -

DNA sequence :
ATGAATCCATATATAGAAATTGCAGGAAGAAAAATAGGAGCCAATTTTCCCCCTTTAGTAATTGCCGAAATAGGTATTAA
TCACGAAGGATCCTTACAAGTAGCCAAGGAAATGGTTGCTGCTGCCCATCGTGCAGGCGCTGAGGTCGTCAAGCACCAAA
CCCATATCGTAGCCGATGAAATGTGTGGGGCCGCCAAGAAAGTAATTCCTGGCAATGCCACGGTTTCTATTTATGAAATC
ATGGAACGTTGTGCCCTAAACGAGGCTGACGAATTAGAATTAAAAAACTACGTAGAAAGTTTAGGCATGATTTTTATCTC
TACGCCATTTTCTCGTGCAGCTGCCGAAAGACTAAAAAAATTTGATATTCCAGCCTATAAAATTGGCTCGGGCGAATGCA
ATAATTATCCATTACTAGAACATATTGCTACTTTTGGCAAACCCGTCATTTTAAGTACGGGTATGAATACCATAGAGAGT
ATTGCCAAAGCCGTGGCTATTTTCGACAAACACAATATTCCAGTAGCCTTATTACACACCACTAATTTATATCCAACCCC
CATTCATTTGGTTCGTTTTGGAGCCATGCAAGCCATGCACGAAGCATTTCCAGATAAAGTTTTCGGATTATCAGATCACA
CCTTAAATAATAATGCTTGCTTGGGTGCAGTGGCTTTGGGTGCCAGTATTTTAGAACGACACTTTACCGATCACATGCAA
CGCACAGGCCCAGACATTATTTGCAGCATGAACGAAAAGGCTTGCGCCGAACTAATCGTCAATTCGGCCGAAATAGCCTT
AATGCGTGGCGGTACTAAAAAACCTGCCCATGAAGAACAAGTAACCATCGACTTTGCTTTTGCAACAGTTTGCACCATAA
AGCCCATAAAAAAAGGCGACGTTTTTACCAAAGAAAACATTTGGGTAAAACGCCCAGGCACAGGAAAAATTTTGGCCAAA
CATTTCAATACTATTTTAGGAAAAGTAGCTACTCAGGCTATAAATGACGATACGCAGCTAACTTGGAGCGATGTTAAGTA
G

Protein sequence :
MNPYIEIAGRKIGANFPPLVIAEIGINHEGSLQVAKEMVAAAHRAGAEVVKHQTHIVADEMCGAAKKVIPGNATVSIYEI
MERCALNEADELELKNYVESLGMIFISTPFSRAAAERLKKFDIPAYKIGSGECNNYPLLEHIATFGKPVILSTGMNTIES
IAKAVAIFDKHNIPVALLHTTNLYPTPIHLVRFGAMQAMHEAFPDKVFGLSDHTLNNNACLGAVALGASILERHFTDHMQ
RTGPDIICSMNEKACAELIVNSAEIALMRGGTKKPAHEEQVTIDFAFATVCTIKPIKKGDVFTKENIWVKRPGTGKILAK
HFNTILGKVATQAINDDTQLTWSDVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
siaC NP_273132.1 polysialic acid capsule biosynthesis protein SiaC Not tested IHT-A Protein 1e-97 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
neuB YP_001296150.1 Sialic acid synthase (N-acetylneuraminic acid synthetase) VFG0252 Protein 5e-98 63