Gene Information

Name : smpB (FP1884)
Accession : YP_001296752.1
Strain : Flavobacterium psychrophilum JIP02/86
Genome accession: NC_009613
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0691
EC number : -
Position : 1722328 - 1722780 bp
Length : 453 bp
Strand : -
Note : -

DNA sequence :
ATGCTAAAAACAGTTAACATACTAAATAAAAGAGCCAAATTCGAATACGAAATCATCGATCGATACACTGCTGGTATGGT
TTTAACTGGTACCGAAATAAAATCGATACGGTTAGGGAAAGCTAATATTGCCGAAAGTTTTTGTGAGTTTCAAGGTGACG
AGCTTTTTGTTATTAACTCTCATATCGAAGAATATCTTTTTGGTCATCAATACAATCACAAGCCAAAAAGCGAACGCAAA
CTCCTTTTAAACAAGAGAGAATTAAAAGGATTACTAAAAGATGTTCAGAATAAAGGACTTACAATTATTCCTTTGCGTTT
ATTTACAAACGAAAAAGGAATGGCCAAATTAGACATTGCTCTTTGTAAAGGAAAGAAAACTTTCGACAAGCGAGAAACTA
TAAAAGACCGAGATAATAAGCGTGATTTAGACCGAATTAAAAAAGAATTTTAA

Protein sequence :
MLKTVNILNKRAKFEYEIIDRYTAGMVLTGTEIKSIRLGKANIAESFCEFQGDELFVINSHIEEYLFGHQYNHKPKSERK
LLLNKRELKGLLKDVQNKGLTIIPLRLFTNEKGMAKLDIALCKGKKTFDKRETIKDRDNKRDLDRIKKEF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 8e-17 42
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 3e-10 41