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Name : clpB (FP1765) Accession : YP_001296639.1 Strain : Flavobacterium psychrophilum JIP02/86 Genome accession: NC_009613 Putative virulence/resistance : Virulence Product : ATPase with chaperone activity ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1590685 - 1593285 bp Length : 2601 bp Strand : - Note : - DNA sequence : ATGAATATTAATAAATTTACAATCAAATCTCAAGAAGCCATTCAGGCAGCACAACAATTAGCCCAAAGCTTCGGACAGCA GCAAATAGAAAACGAACACATTTTTAAAGCCATTTTTGATGTTGATGAAAATGTTGCTCCGTTTATTTTGAAAAAACTCA ATATAAATGTGCCTTTGTTTCAAAAAATTTTAGACAGCACAATTCAGAGCTTTCCAAAGGTTTCTGGTGGCGAAATTATG CTTTCCAGAACCGCAAACACAATGCTAAACGAAGCTGAAATCATCGCAAAAAAAATGAACGATGAATTTGTTTCTATCGA GCATTTACTCCTAGCTATTTTTGCCTCAAAAAGCAAAGTAGCCCAAATATTAAAAGATCAAGGCGTAACCGAAAAAGGAT TAAAAGCTTCTATTGATGAACTTAGAAAAGGCGAAAGAGTAACTTCTGCATCTGCCGAAGAAAATTATAACTCATTAAAT AAATACGCCAAAAACCTTAACGAATTAGCTAAAAACGGAAAACTAGACCCTGTAATTGGACGTGATGAGGAAATTCGTCG TGTATTACAAATTTTAACCCGTAGAACTAAAAATAACCCAATGCTGGTAGGAGAACCTGGTGTTGGAAAAACCGCAATCG CTGAAGGATTGGCTCACAGAATTGTAGATGGAGATGTTCCTGATAACCTAAAAGATAAAATAGTATTCTCACTCGATATG GGAGCATTAATTGCAGGAGCAAAATACAAAGGAGAATTTGAAGAACGGTTAAAAGCTGTGGTAAAAGAAGTTACTGCCGC CGAAGGAGATATCGTTTTATTTATAGACGAAATACACACACTTGTTGGCGCTGGTGGAGGCGAAGGGGCTATGGATGCAG CAAATATACTAAAACCCGCTCTAGCACGAGGAGAATTGCGAGCCATTGGTGCTACAACTTTAGATGAATATCAAAAATAT TTTGAAAAAGATAAAGCACTCGAGCGCCGTTTTCAGAAAATTATGGTAGAAGAACCAGATACTGAAAGTGCCATTTCTAT CCTGCGAGGAATTAAAGAGAAATACGAAACGCACCATAAAGTTCAGATAAAAGATGAAGCCATTATTGCTGCAGTCGAAT TGTCTCAACGTTATATAACCAACCGTTTTTTACCAGACAAAGCGATCGATTTGATGGATGAAGCGGCTTCAAAACTGCGC ATGGAAATCAATTCAAAACCAGAAGAATTAGATGTTCTGGATCGAAAAATCATGCAACTAGAGATTGAAATTGAAGCCAT TAAAAGAGAAAAAGACGAAAGTAAACTCAAAATATTAGGAATGGATTTGGCAAATCTAAAAGAAGATCGAAACGAAATTT ATGCCAAATGGAAGTCTGAAAAAGATGTGGTCGATAATATTCAAGCTATAAAAACAGAAATTGAGGATTTTAAATACGAA GCCGAACGTGCAGAGCGTGATGGCGATTACGGAAAAGTAGCAGAAATACGTTACGGAAAAATAAAAGAATCACAAGAACG ATTAGACGTTTTACAAAAACAATTAATAGAAAACCAATCAGGTACTTCCTTAATAAAAGAAGAAGTAACTAGAGAAGATA TTGCCGAAGTAGTCGCAAAATGGACAGGGATTCCAGTGATGAAAATGTTGCAAGGAGAACGTGAAAAACTCTTACATCTA GAACAAGAATTACATAGAAGAGTCGTGGGACAAGAAGAAGCCATAGAAGCCGTGAGCGATGCAGTTCGTAGAAGTCGTGC TGGTTTACAAGACTTAAAAAAACCAGTTGGAACCTTTCTTTTCTTAGGTACAACTGGTGTAGGAAAAACCGAATTAGCAA AAGCACTAGCCGAATATCTTTTTGATGATGAAAATGCCATGACTAGAATAGATATGAGCGAATACCAAGAGCGTCACAGT GTGAGTAGATTAGTTGGTGCGCCTCCAGGATATGTAGGTTATGACGAAGGAGGTCAGCTTACGGAAGCCGTTCGTAGAAA ACCATATTCTGTAATTTTATTAGATGAAATTGAGAAAGCACATCCTGACACTTTTAATATTCTATTGCAAGTATTAGATG AAGGACGATTAACAGATAATAAAGGACGTTTAGCCGATTTTAAAAATACCATTATTATTATGACTTCTAATATGGGAAGC CAAATAATTCAGGATAAATTTGAGAATCTCAAAGGAAGTCTCGATGCTGCAACTGAAGCTGCAAAAGTAGAAGTTCTAGC CTTGCTGAAACAAACCGTTCGTCCAGAATTTATTAATCGTATCGACGAAATTGTAATGTTTACACCACTTACAAATGCTA ATATTGCCCAAATTGTAGGTTTACAACTCAAATCGGTAACTAAAATGCTAGCATTACAAGGAATAACTATGGACGCTACT CCAGAAGCGATTACTTATTTATCTGAAAAAGGGTATGATCCCCAATTTGGTGCTAGACCAGTAAAGAGAGTTATACAACG TGATGTATTAAACCAATTATCGAAGGAAATTTTAGCAGGAACTATAGCAACCGATAGCATTATTTTATTAGATGCTTTTG ATGGAAAATTAGTTTTCAGGAACCAATCTAATACCATTTAA Protein sequence : MNINKFTIKSQEAIQAAQQLAQSFGQQQIENEHIFKAIFDVDENVAPFILKKLNINVPLFQKILDSTIQSFPKVSGGEIM LSRTANTMLNEAEIIAKKMNDEFVSIEHLLLAIFASKSKVAQILKDQGVTEKGLKASIDELRKGERVTSASAEENYNSLN KYAKNLNELAKNGKLDPVIGRDEEIRRVLQILTRRTKNNPMLVGEPGVGKTAIAEGLAHRIVDGDVPDNLKDKIVFSLDM GALIAGAKYKGEFEERLKAVVKEVTAAEGDIVLFIDEIHTLVGAGGGEGAMDAANILKPALARGELRAIGATTLDEYQKY FEKDKALERRFQKIMVEEPDTESAISILRGIKEKYETHHKVQIKDEAIIAAVELSQRYITNRFLPDKAIDLMDEAASKLR MEINSKPEELDVLDRKIMQLEIEIEAIKREKDESKLKILGMDLANLKEDRNEIYAKWKSEKDVVDNIQAIKTEIEDFKYE AERAERDGDYGKVAEIRYGKIKESQERLDVLQKQLIENQSGTSLIKEEVTREDIAEVVAKWTGIPVMKMLQGEREKLLHL EQELHRRVVGQEEAIEAVSDAVRRSRAGLQDLKKPVGTFLFLGTTGVGKTELAKALAEYLFDDENAMTRIDMSEYQERHS VSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVILLDEIEKAHPDTFNILLQVLDEGRLTDNKGRLADFKNTIIIMTSNMGS QIIQDKFENLKGSLDAATEAAKVEVLALLKQTVRPEFINRIDEIVMFTPLTNANIAQIVGLQLKSVTKMLALQGITMDAT PEAITYLSEKGYDPQFGARPVKRVIQRDVLNQLSKEILAGTIATDSIILLDAFDGKLVFRNQSNTI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 2e-94 | 42 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 1e-94 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_001296639.1 | ATPase with chaperone activity ATP-binding subunit | VFG2076 | Protein | 2e-115 | 43 |
| clpB | YP_001296639.1 | ATPase with chaperone activity ATP-binding subunit | VFG2084 | Protein | 7e-101 | 43 |
