Gene Information

Name : CGSHiGG_04620 (CGSHiGG_04620)
Accession : YP_001292256.1
Strain : Haemophilus influenzae PittGG
Genome accession: NC_009567
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 864435 - 865316 bp
Length : 882 bp
Strand : -
Note : -

DNA sequence : 
ATGCGAAATTCATTCAAAATTATGACCGCACTTGCACTTGGTTTATTTGCAATGCAAGCTAACGCAAAATTTAAAGTAGT
TACCACCTTCACCGTGATTCAAGATATTGCGCAAAATGTGGCAGGCAATGCGGCAACGGTGGAATCTCTTACTAAACCTG
GCGCAGAAATTCACGAATATGAACCAACGCCAAAAGACATTGTAAAAGCGCAATCTGCTGATTTAATTTTATGGAATGGC
TTAAATTTGGAACGTTGGTTTGAGCGTTTCTTCCAAAATGTTAAAGATAAACCTGCTGTGGTAGTAACAGAAGGTATTCA
ACCATTATCTATTTATGAAGGCCCGTATAAAGATGCGCCTAACCCACATGCGTGGATGTCGCCATCTAATGCTTTAATTT
ATATTGAAAATATTAAAAATGCGTTAGTGAAATACGATCCACAAAATGCAGCTGTATATGAAAAAAATGCCGCTGACTAT
GCTCAAAAAATTAAACAACTTGATGAACCGCTTCGTGCAAAATTAGCACAAATTCCAGAAGAGCAACGCTGGCTTGTAAC
AAGTGAGGGTGCTTTCAGTTATTTGGCGAAAGATTACAACTTAAAAGAAGGTTATTTATGGCCAATCAATGCTGAACAAC
AAGGCTCACCACAACAAGTGCGTAAAGTGATTGATTTAGTTCGTAAAAACAATATTCCAGTTGTGTTTAGTGAAAGTACA
ATTTCAGCGAAACCTGCACAACAAGTAGCGAAAGAAAGTGGCGCAAAATACGGTGGCGTATTGTATGTTGATTCACTTTC
TGCGAAAGAAGGCCCAGTGCCAACTTATATTGATTTGCTTAACGTCACTGTATCAACCATTGTTAAAGGATTCGGAAAAT
AA

Protein sequence : 
MRNSFKIMTALALGLFAMQANAKFKVVTTFTVIQDIAQNVAGNAATVESLTKPGAEIHEYEPTPKDIVKAQSADLILWNG
LNLERWFERFFQNVKDKPAVVVTEGIQPLSIYEGPYKDAPNPHAWMSPSNALIYIENIKNALVKYDPQNAAVYEKNAADY
AQKIKQLDEPLRAKLAQIPEEQRWLVTSEGAFSYLAKDYNLKEGYLWPINAEQQGSPQQVRKVIDLVRKNNIPVVFSEST
ISAKPAQQVAKESGAKYGGVLYVDSLSAKEGPVPTYIDLLNVTVSTIVKGFGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 2e-94 67
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 2e-94 67
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 2e-94 67
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-94 67
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 2e-94 67

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CGSHiGG_04620 YP_001292256.1 hypothetical protein BAC0439 Protein 4e-102 74
CGSHiGG_04620 YP_001292256.1 hypothetical protein BAC0349 Protein 1e-94 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CGSHiGG_04620 YP_001292256.1 hypothetical protein VFG0525 Protein 1e-94 67