Gene Information

Name : CGSHiGG_04605 (CGSHiGG_04605)
Accession : YP_001292255.1
Strain : Haemophilus influenzae PittGG
Genome accession: NC_009567
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 862662 - 863510 bp
Length : 849 bp
Strand : -
Note : -

DNA sequence : 
ATGTTAGATTTATTGCTCGAACCTTTTTCCTATGATTATATGCTCAAGGCGATGATCTTGAGTACCGCAGTTGGTGGGAT
TTGTGCGTTTTTGTCTTCATATTTAATGCTCAAAGGTTGGTCTCTAATTGGCGATGCACTTTCCCATTCCGTTGTACCTG
GTGTTGCAATTGCCTATGCTTTTGCCTTGCCTTACGCACTTGGTGCATTTTTCGCTGGAATTTTAGCCGCACTTTCCATT
CTTTGGATTAAATCCATTTCTAAACTGAAAGAAGATGCCGTTATCGGGTTTATTTTCAGTACTTTCTTTGCATTAGGTCT
ATTGATTATTTCTTTAAATCCAACCGCAGTAAATGTGCAAAATATCATTTTAGGTAATATTTTAGGCATTGCCGATGAAG
ATATTTACCAAGTCGCAATTATTATCGGTGTTTGTTTAGTATTACTTTTATTATTTTGGAAGGATTTACTGCTGATTTTT
TTCGATGAAACTCAAGCGATTACAGTCGGTCTTTCCCCATTATTTTATAAAATCTTATTTTTCACATTATTAAGTGCTTG
TGTGGTAGCTGCCTTGCAAACTGTAGGCGCGATTTTAGTGATTGCGATGGTTATTACCCCAGGTGCAACAGCATATTTAC
TAACGGATAAATTCAAAACCTTGTCAATCATCGCTATTATTTTAGGGGCGGTGACAAGTTTTGTTGGAGTCTATATTAGC
TATTATTTAGATGGTGCCACAGGCGGTGTGATTGTGACATTGCAAACATTATTATTCTTGGTTGCCTTCTTGTTTTCACC
AAAATATGGCTTACTCACTCGTAATAAAAAGGCGGTAGAAAATGTTTGA

Protein sequence : 
MLDLLLEPFSYDYMLKAMILSTAVGGICAFLSSYLMLKGWSLIGDALSHSVVPGVAIAYAFALPYALGAFFAGILAALSI
LWIKSISKLKEDAVIGFIFSTFFALGLLIISLNPTAVNVQNIILGNILGIADEDIYQVAIIIGVCLVLLLLFWKDLLLIF
FDETQAITVGLSPLFYKILFFTLLSACVVAALQTVGAILVIAMVITPGATAYLLTDKFKTLSIIAIILGAVTSFVGVYIS
YYLDGATGGVIVTLQTLLFLVAFLFSPKYGLLTRNKKAVENV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 5e-66 63
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 5e-66 63
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 6e-66 63
sitC NP_461784.1 permease Virulence SPI-1 Protein 6e-66 63
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 5e-66 63

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CGSHiGG_04605 YP_001292255.1 hypothetical protein BAC0441 Protein 8e-72 71
CGSHiGG_04605 YP_001292255.1 hypothetical protein BAC0351 Protein 3e-66 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CGSHiGG_04605 YP_001292255.1 hypothetical protein VFG0527 Protein 3e-66 63