Gene Information

Name : CGSHiGG_04600 (CGSHiGG_04600)
Accession : YP_001292254.1
Strain : Haemophilus influenzae PittGG
Genome accession: NC_009567
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 861854 - 862669 bp
Length : 816 bp
Strand : -
Note : -

DNA sequence : 
ATGTTTGATTGGATTTTAGAACCGCTACAATTTGAGTTTATGCAAAATGCCTTATTGACCGCATTGATTGTTTCAATTAT
TTGTGCGTTGCTTTCTTGTTATTTAGTCTTGAAAGGTTGGTCATTAATGGGTGATGCGATTTCTCACGCTGTATTACCTG
GTATTGTACTTGCTTATTTGGCAGGAATCCCTTTAGCGATTGGTGCATTTTTTTCAGGCATTTTTTGCTCGCTTGGTGTG
GGATATTTAAAAGAAAATAGTCGTATAAAAGAAGATACCGCAATGGGCATTGTATTTTCTGGAATGTTTGCTATTGGTTT
GGTTATGTTTACCAAAATTCAAACAGAACAGCATTTAAGCCATATTTTGTTTGGTAATGTGTTGGGTGTAAGTCATCAAG
AGCTGATTCAAAGTGCGGTCATTTCTGCGATAATTTTTTGTCTGATTGTCTTTAAACGTAAAGACTTTTTGCTTTATTGT
TTTGACCCAAACCACGCCCGTGTTGCAGGGCTTTCTCCTAAAATTTTACATTATGGTTTGTTAATGCTGCTTGCTTTAAC
TATTGTAAGCACCATGCAAGTGGTCGGCGTTATTTTGGTGGTGGCAATGTTAATTGCGCCAGGAATTACTGCACTTACGC
TAACAAAATCTTTTGATAAAATGCTATGGATTGCTATTGTCAGTTCCATCACATTAAGTCTAATAGGCGTAATATTGAGC
TATCATTTTGATGCCTCAACAGGTGCTTGTATTATTCTTCTGCAAGCCGCATTTTTTGTTATAGCATTAGCTTATAGCAA
GATTAGAATAAGATAA

Protein sequence : 
MFDWILEPLQFEFMQNALLTALIVSIICALLSCYLVLKGWSLMGDAISHAVLPGIVLAYLAGIPLAIGAFFSGIFCSLGV
GYLKENSRIKEDTAMGIVFSGMFAIGLVMFTKIQTEQHLSHILFGNVLGVSHQELIQSAVISAIIFCLIVFKRKDFLLYC
FDPNHARVAGLSPKILHYGLLMLLALTIVSTMQVVGVILVVAMLIAPGITALTLTKSFDKMLWIAIVSSITLSLIGVILS
YHFDASTGACIILLQAAFFVIALAYSKIRIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-66 54
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 1e-66 54
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 1e-66 54
sitD NP_461785.1 permease Virulence SPI-1 Protein 6e-67 54
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 4e-67 54
EF0576 NP_814341.1 cation ABC transporter permease Not tested Not named Protein 9e-41 41
ef0094 AAM75297.1 EF0094 Not tested Not named Protein 7e-41 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CGSHiGG_04600 YP_001292254.1 hypothetical protein BAC0442 Protein 6e-81 63
CGSHiGG_04600 YP_001292254.1 hypothetical protein BAC0352 Protein 3e-67 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CGSHiGG_04600 YP_001292254.1 hypothetical protein VFG0528 Protein 2e-67 54