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Name : xerD (CGSHiGG_04360) Accession : YP_001292216.1 Strain : Haemophilus influenzae PittGG Genome accession: NC_009567 Putative virulence/resistance : Unknown Product : site-specific tyrosine recombinase XerD Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 821437 - 822330 bp Length : 894 bp Strand : + Note : site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers d DNA sequence : ATGAAAAATCTTGCACTTATTGATTTGTTCCTTAACGAATATTGGATTGAAAAAGGGCTTTCAGAAAATACCGTTCAATC TTATCGTTTGGATTTAACCGCACTTTGTGATTGGTTGGATAAAAACGACTTGTCTTTGGAAACTTTAGATGCTGTTCATT TGCAAGGTTTTCTGGGTGAACGTCTAGAGAAAGGTTACAAAGCCACGAGCACTGCGCGAATGTTAAGTGCAATACGTAAA CTTTTCCAATATTTATATCGGGAAAAATATCGAGTGGATGATCCAAGTGCGGTGCTAAGTTCGCCTAAATTACCCAGTCG CTTGCCAAAATATTTAACCGAGCAACAAGTGTCTGATTTGCTCAATACGCCAGATGTGGAAGTGCCTTTGGAGTTGCGTG ATAAAGCAATGTTAGAGTTGCTTTATGCAACGGGGCTTCGTGTCACGGAGTTAGTTTCGCTTACGATTGAAAACATGAGT GTGCAACAAGGCGTGGTGCGAGTGATTGGTAAAGGGAACAAAGAGCGTATTGTGCCAATGGGGGAAGAAGCTGCTTATTG GGTTCGTCAATTTATGCTGTATGGTCGCCCTGTTCTCTTAAATGGGCAGAGTTCTGATGTTGTGTTTCCAAGTCAGCGCA CACAGCAAATGACTCGTCAAACTTTCTGGCATCGTGTAAAACATTATGCCATTCTCGCAGATATTGATGCGGATGCACTT TCCCCTCACGTTCTCCGCCATGCTTTTGCCACCCATTTAGTGAATCACGGTGCGGATTTACGCGTGGTGCAAATGTTGTT GGGTCATACAGATTTATCTACAACACAGATTTATACTCACGTGGCAAAAGAAAGATTGAAACGATTGCATGAAAGATTTC ATCCTAGAGGATAA Protein sequence : MKNLALIDLFLNEYWIEKGLSENTVQSYRLDLTALCDWLDKNDLSLETLDAVHLQGFLGERLEKGYKATSTARMLSAIRK LFQYLYREKYRVDDPSAVLSSPKLPSRLPKYLTEQQVSDLLNTPDVEVPLELRDKAMLELLYATGLRVTELVSLTIENMS VQQGVVRVIGKGNKERIVPMGEEAAYWVRQFMLYGRPVLLNGQSSDVVFPSQRTQQMTRQTFWHRVKHYAILADIDADAL SPHVLRHAFATHLVNHGADLRVVQMLLGHTDLSTTQIYTHVAKERLKRLHERFHPRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 5e-53 | 47 |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 5e-53 | 47 |
