Gene Information

Name : CGSHiGG_03320 (CGSHiGG_03320)
Accession : YP_001292040.1
Strain : Haemophilus influenzae PittGG
Genome accession: NC_009567
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1638
EC number : -
Position : 618333 - 619319 bp
Length : 987 bp
Strand : +
Note : COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component

DNA sequence : 
ATGAAATTGACAAAACTTTTCCTTGCCACCGCCATTTCTTTAGGCGTATCTTCTGCTGTTCTTGCCGCTGATTATGACTT
GAAATTCGGTATGAATGCTGGAACTTCATCAAATGAATATAAAGCGGCAGAAATGTTTGCCAAAGAAGTCAAAGAAAAAT
CACAGGGTAAAATTGAAATTTCACTTTATCCAAGTTCACAATTAGGTGATGACCGTGCAATGTTAAAACAATTAAAAGAC
GGTTCTCTCGACTTTACCTTTGCAGAATCTGCTCGCTTCCAGCTGTTTTACCCTGAAGCGGCAGTATTTGCCTTACCTTA
TGTTATTAGCAACTACAATGTTGCACAAAAAGCCTTATTCGATACAGAATTCGGTAAAGATTTAATTAAAAAAATGGACA
AAGATCTTGGCGTGACTTTACTTTCCCAAGCTTATAACGGAACTCGCCAAACGACTTCAAATCGTGCAATCAACAGTATT
GCAGATATGAAAGGCTTAAAACTTCGTGTGCCAAATGCAGCAACAAACTTAGCCTATGCTAAATATGTTGGCGCATCACC
AACACCAATGGCATTTTCTGAAGTTTATCTTGCGTTACAAACCAATGCCGTCGATGGTCAAGAAAACCCGTTAGCAGCGG
TGCAAGCACAAAAATTCTATGAAGTGCAAAAGTTCTTAGCAATGACTAATCACATTTTGAATGACCAACTTTATTTAGTA
AGCAACGAGACTTATAAAGAACTCCCTGAAGATCTTCAAAAAGTCGTAAAAGATGCTGCCGAAAATGCAGCAAAATATCA
CACTAAATTATTCGTAGATGGAGAGAAAGATTTAGTCACATTCTTTGAAAAACAAGGCGTGAAAATTACACATCCTGATC
TTGTTCCATTTAAAGAATCAATGAAGCCGTATTATGCTGAGTTTGTAAAACAAACTGGTCAAAAAGGTGAATCAGCTTTA
AAACAAATTGAAGCAATCAATCCATAA

Protein sequence : 
MKLTKLFLATAISLGVSSAVLAADYDLKFGMNAGTSSNEYKAAEMFAKEVKEKSQGKIEISLYPSSQLGDDRAMLKQLKD
GSLDFTFAESARFQLFYPEAAVFALPYVISNYNVAQKALFDTEFGKDLIKKMDKDLGVTLLSQAYNGTRQTTSNRAINSI
ADMKGLKLRVPNAATNLAYAKYVGASPTPMAFSEVYLALQTNAVDGQENPLAAVQAQKFYEVQKFLAMTNHILNDQLYLV
SNETYKELPEDLQKVVKDAAENAAKYHTKLFVDGEKDLVTFFEKQGVKITHPDLVPFKESMKPYYAEFVKQTGQKGESAL
KQIEAINP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1779 NP_231414.1 C4-dicarboxylate-binding protein Not tested VPI-2 Protein 7e-70 50
dctP-1 YP_001217320.1 C4-dicarboxylate-binding periplasmic protein Not tested VPI-2 Protein 7e-70 50
VPI2_0027c ACA01844.1 C4-dicarboxylate-binding periplasmic protein Not tested VPI-2 Protein 3e-70 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CGSHiGG_03320 YP_001292040.1 hypothetical protein VFG1112 Protein 3e-70 50