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Name : CGSHiGG_03125 (CGSHiGG_03125) Accession : YP_001292008.1 Strain : Haemophilus influenzae PittGG Genome accession: NC_009567 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 573421 - 574710 bp Length : 1290 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGATCGATCCAAATTTACTCCGTAATAATTTAGCAGAAGTCGCAGAAAAATTAAAAGTAAAACGCAACTTTATGCTTGA TACGGAAAAACTCACTGCGTTAGAAGATCAGCGCAAAAACTTACAAGTCACTACCGAAAACTTACAAGCGGAACGTAATG CTCGTTCCAAAGCCATTGGTGCTGCTAAAGCACGTGGTGAAGATATCGCACCATTATTGGCAGAAATGGATGATATGGGC AATCAATTGACTGAAGCAAAAGCACAATTAGATGCGGTACTTGCAGAAATCAATCAAATTGCACTAAGTATTCCAAATCT ACCCGCGGACGAAGTGCCATTAGGCAAAGATGACACAGAAAATAAAGAAATCTTACGTTGGGGAACACCGCGTACATTTG ATTTTGAAGTCAAAGATCATGTCACTTTGGGTGAAGAAGCAAATGGCTTAGATTTTGCTGCTGGGGCTAAATTAACTGGT GCGCGTTTTGCCGTAATGAAAGGTCAAATCGCTAAAATGCACCGCGCATTGGCACAATTCATGTTAGATCTTCATACGGA ACAACACGGCTATTTAGAAACCTATGTGCCTTATTTAGTAAATCACGCCACACTTTATGGAACAGGGCAATTACCAAAAT TCGGGGAAGATTTATTCCATACTTTAGCCTTACAAGGCGAACAACCTTACGCATTAATTCCAACCGCAGAAGTGCCAGTC ACTAATTTAGTGCGTGATGTAATTATTGATGAAGCAGAATTACCAATAAAAATGACCGCACATACGCCATGTTTCCGTTC TGAAGCAGGCTCTTACGGTCGTGATACTCGTGGTTTAATTCGTATGCACCAATTTGATAAAGTAGAAATGGTACAAATCG TTGATCCAGATAAATCAATGGAAGCACTTGAAGAATTAACAGGTCATGCGGAAAAAGTATTGCAATTATTAAATTTACCA TACCGTAAAGTTTTACTTTGCACAGGCGATATGGGCTTTGGTTCTTGCAAGACTTACGATTTAGAAGTCTGGGTGCCTGC ACAAAATACTTATCGTGAAATTTCTTCTTGCTCAAATATGTGGGATTTCCAAGCTCGCCGTATGCAAGCACGTTGTAAAG CAAAAGGGGATAAGAAAACCCACTTAGTGCATACCTTAAATGGTTCTGGCTTGGCTGTTGGTCGTACTTTAGTGGCTGTG CTTGAAAACTATCAAAATGCCGATGGTTCAATCACCGTGCCAGAAGTGCTACGTCCATATATGGGCGGATTAGACGTTAT CGGAAAATAA Protein sequence : MIDPNLLRNNLAEVAEKLKVKRNFMLDTEKLTALEDQRKNLQVTTENLQAERNARSKAIGAAKARGEDIAPLLAEMDDMG NQLTEAKAQLDAVLAEINQIALSIPNLPADEVPLGKDDTENKEILRWGTPRTFDFEVKDHVTLGEEANGLDFAAGAKLTG ARFAVMKGQIAKMHRALAQFMLDLHTEQHGYLETYVPYLVNHATLYGTGQLPKFGEDLFHTLALQGEQPYALIPTAEVPV TNLVRDVIIDEAELPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVDPDKSMEALEELTGHAEKVLQLLNLP YRKVLLCTGDMGFGSCKTYDLEVWVPAQNTYREISSCSNMWDFQARRMQARCKAKGDKKTHLVHTLNGSGLAVGRTLVAV LENYQNADGSITVPEVLRPYMGGLDVIGK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-104 | 53 |
