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Name : CGSHiGG_03090 (CGSHiGG_03090) Accession : YP_001292001.1 Strain : Haemophilus influenzae PittGG Genome accession: NC_009567 Putative virulence/resistance : Virulence Product : putative type I site-specific restriction-modification system, R subunit Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 565268 - 568288 bp Length : 3021 bp Strand : + Note : COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases DNA sequence : ATGGTTTCAGGAACTAAGGAAAAAGATTTGGAAATTGCCATCGAGAAAGCTTTAACCGGCACTTGGCGTGAAAACATGGA AAATAAGCTGGGCGAGCCGAAGGCGGAATACCTGCCACGCCATCATGGCTTTAAGTTGGCATTTTCACAGGATTTTGATG CGAAGTTTGCGATTGACTTGCGTCTGTTTTGGCAATTCCTGCAAACCGGCCAAAAGGCAGAACTTGTCCGTTTTCAACAG CTCAATCCAAACGACTGGCAACGTAAAATTCTAGAGCGGTTAGACCGCCAAATAAAGAAATATGGCGTATTGCAACTCTT GAAAAAAGGCTTGGACATTGATAGCGCCCATTTTGATTTGCTCTACCCCGTTCCGCTTGCCAGCAGCGGTGAAAAGGTCA AGCAGCGTTTTGAACAGAATCTGTTTAGCTGTATGCGACAAGTGCCTTATTCCGCATCAAGCAATGAAACAGTGGATATG GTGCTGTTTGTCAATGGCTTGCCAATCATTACCCTTGAGCTGAAAAACCATTGGACGGGTCAGACGGCTATTGATGCCCA AAAACAATATCGCAACCGAGATTTAAGCCAAACGCTGTTTCATTTTGGGCGTTGTTTGGCGCATTTTGCCTTAGATACGG AAGAAGCTTATATGACCACCAAGCTGGCGGGGTCTGATACGTTTTTCTTGCCGTTCAATTTGGGCAACAACTATGGCAAA GGCAACCTGGCCAATCCAAATGGGCACCGCACGGCGTATTTATGGCAAGAGGTGTTCAGCAAAGCCAGCCTTGCCAACAT TATTCAGCATTTTATGCGTTTAGATGGGTCAACCAAAGATCCACTGGAGAAACGCTCGCTCTTTTTCCCTCGTTATCATC AATTAGAGGTGGTGCGCCGTTTGATTGCGGATGTCAGTGAACAAGGCGTGGGCAAACGCTATTTGATTCAACACTCTGCC GGCTCGGGTAAGTCTAATTCCATTACTTGGTTGGCGTATCAGTTGATTGAGGCTTATCCGCGCAATGAAAAGGCGGCAAA CGGCAGGGAGGCAGACCGCCCGATTTTTGATTCGGTGATTGTCGTAACCGACCGTCGTTTGCTGGATAAACAGCTGCGCG ACAATATCAAAGATTTTTCGGAAGTTAAAAACATTGTTGCGCCGGCGTTGAGTTCGGCGGAATTGCGCCAATCGCTTGAG CAGGGCAAAAAAATCATTATTACCACGATTCAAAAATTTCCGTTTATTGTCGATGGCATTGCTGATTTAGGCGACAAACA ATTTGCGGTGATTATTGATGAGGCACACAGCTCACAATCAGGTTCGGCACACGACAATATGAACCGGGCCATCGGCAAAA CGGAAGACCTTGATGCCGAAGATGTGCAAGATTTGATTTTACAAACCATGCAATCCCGCAAAATGCGCGGTAATGCGTCG TATTTTGCTTTCACCGCCACACCGAAAAACAGCACTTTGGAAAAATTCGGCGAGAAACAGGCGGATGGCAAGTTTAAGCC GTTCCACCTTTATTCTATGAAGCAGGCGATTGAAGAAGGCTTTATTTTGGATGTAATCGCCAATTACACCACCTATAAAA GTTTTTATGAGATCACTAAATCGATTGAAGATAATCCGGAGTTTGATAGTAAGAAGGCTCAAGGCCGTCTGAAAGCTTAT GTGGAGTGCTCTCAACAAACGATTGATACCAAGGCAGAAATCATGCTGGATCATTTTATCCAGCAAATCTTGAACCGTAA AAAACTCAAAGGCAAAGCCAAGGGAATGGTGGTAACACAAAATATTGAAACGGCCATTCGTTATTTTCAGGCGTTAAACC GCCTTTTAGCTGAACGAGGTAATCCGTTTAAAATCGCCATTGCGTTTTCAGGCAGTAAAGTGGTTGATGGTGTTGAATAC ACCGAAGCGGAAATGAACGGCTTTGCAGAAAGCGAAACCAAAGAGTATTTCGATCAAGATGAATATCGTTTGCTGGTGGT CGCCAATAAATATCTGACCGGTTTTGACCAGCCGAAATTGTGTGCGATGTATGTGGATAAGAAACTCTCCGGCGTACTTT GTGTGCAAGCTTTATCTCGTTTAAATCGCAGTGCGAATAAGTTGGGTAAACGCACGGAAGATTTGTTTGTGTTGGACTTT TTTAACAGCGTTGAAGATATTCAGCAAGCATTTGAGCCGTTTTATACTTCTACGTCGTTGTCGCAAGCAACCGATGTCAA TGTCTTGCATGATTTGAAAGATCAGTTGGATGAAACAGGCGTGTATGAACAAGCGGAGGTCAACGATTTTACTGAAGGCT ATTTTGCCAATAAAGACGCACAACAATTAAGCAGTATTATTGATGTAGCTGTCCAACGTTTCGACCATGAGTTGGCGCTT GAGCCAACCCAAAAAGTCGATTTTAAAATCAAGGCAAAACAGTTTTTAAAAATTTACGGGCAAATGGCTTCCATCATCAA TTTTGAAAATATCGCTTGGGAAAAGCTCTATTGGTTCCTCAAATTCTTAGTACCCAAATTAAAAGTACAAGACCCGATGG ATGAATTTGATGAAATTTTAGATGCGGTGGATTTAAGCTCTTACGGCTTGGCACGTACCAAACTGAATTACAGCATTAAA TTAGATGATGAAGAAACAGAGCTTGACCCGCAAAACCCCAATCCGCGTGGTACGCATGGTGAAGATAAAGAAAAAGATCC GATTGATGAAATTATTCGTGTATTTAACGAAAGATGGTTTCAAGATTGGAGCGCAACGCCGGATGAGCAACGGGTAAAAT TTATCAATATTACCGAGCGCATCCGTAGCCATAAAGACTTTGAGCAGAAATATCAAAATAACCCGGATATTCATACCCGT GAATTGGCTTTCCAAGCCATTTTGCGCGATGTGATGAGCGAACGCCACCGAGATGAACTAGAGCTATACAAACTTTTTGC CAAAGATGCCGCATTTAGAACCGCTTGGACGCAAAGTTTGCAACGGGCTTTGGCTGGATAG Protein sequence : MVSGTKEKDLEIAIEKALTGTWRENMENKLGEPKAEYLPRHHGFKLAFSQDFDAKFAIDLRLFWQFLQTGQKAELVRFQQ LNPNDWQRKILERLDRQIKKYGVLQLLKKGLDIDSAHFDLLYPVPLASSGEKVKQRFEQNLFSCMRQVPYSASSNETVDM VLFVNGLPIITLELKNHWTGQTAIDAQKQYRNRDLSQTLFHFGRCLAHFALDTEEAYMTTKLAGSDTFFLPFNLGNNYGK GNLANPNGHRTAYLWQEVFSKASLANIIQHFMRLDGSTKDPLEKRSLFFPRYHQLEVVRRLIADVSEQGVGKRYLIQHSA GSGKSNSITWLAYQLIEAYPRNEKAANGREADRPIFDSVIVVTDRRLLDKQLRDNIKDFSEVKNIVAPALSSAELRQSLE QGKKIIITTIQKFPFIVDGIADLGDKQFAVIIDEAHSSQSGSAHDNMNRAIGKTEDLDAEDVQDLILQTMQSRKMRGNAS YFAFTATPKNSTLEKFGEKQADGKFKPFHLYSMKQAIEEGFILDVIANYTTYKSFYEITKSIEDNPEFDSKKAQGRLKAY VECSQQTIDTKAEIMLDHFIQQILNRKKLKGKAKGMVVTQNIETAIRYFQALNRLLAERGNPFKIAIAFSGSKVVDGVEY TEAEMNGFAESETKEYFDQDEYRLLVVANKYLTGFDQPKLCAMYVDKKLSGVLCVQALSRLNRSANKLGKRTEDLFVLDF FNSVEDIQQAFEPFYTSTSLSQATDVNVLHDLKDQLDETGVYEQAEVNDFTEGYFANKDAQQLSSIIDVAVQRFDHELAL EPTQKVDFKIKAKQFLKIYGQMASIINFENIAWEKLYWFLKFLVPKLKVQDPMDEFDEILDAVDLSSYGLARTKLNYSIK LDDEETELDPQNPNPRGTHGEDKEKDPIDEIIRVFNERWFQDWSATPDEQRVKFINITERIRSHKDFEQKYQNNPDIHTR ELAFQAILRDVMSERHRDELELYKLFAKDAAFRTAWTQSLQRALAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1765 | NP_231400.1 | type I restriction enzyme HsdR | Not tested | VPI-2 | Protein | 0.0 | 68 |
| VC0395_A1363 | YP_001217306.1 | type I restriction enzyme HsdR | Not tested | VPI-2 | Protein | 0.0 | 68 |
| VPI2_0013c | ACA01830.1 | type I restriction enzyme HsdR | Not tested | VPI-2 | Protein | 0.0 | 68 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CGSHiGG_03090 | YP_001292001.1 | putative type I site-specific restriction-modification system, R subunit | VFG1098 | Protein | 0.0 | 68 |
