Gene Information

Name : CGSHiGG_03080 (CGSHiGG_03080)
Accession : YP_001291999.1
Strain : Haemophilus influenzae PittGG
Genome accession: NC_009567
Putative virulence/resistance : Virulence
Product : putative type I restriction-modification system, methyltransferase subunit
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0286
EC number : -
Position : 561338 - 563710 bp
Length : 2373 bp
Strand : +
Note : COG0286 Type I restriction-modification system methyltransferase subunit

DNA sequence :
ATGGATCATTCTGTTCATAACAAGCTGGTTTCTTTTATTTGGAGTATTGCAGACGATTGTCTGCGCGATGTGTATGTGCG
CGGTAAATATCGTGATGTGATTTTACCGATGTTTGTGCTTCGTCGTTTGGATACTTTACTTGAGCCAAGCAAAGATGCCG
TATTGGAAGAAATGCGTTTTCAAAAAGAAGAATTGGCATTCACAGAATTGGATGACCTTCCCCTTAAAAAAATTACCGGT
CATGTTTTTTATAACACCTCAAAATGGACATTAAAATCCCTCTATCAAACCGCCAGCAATACGCCGCAGTATATGCTGGC
CAATTTTGAAGAATATCTTGATGGTTTCAGCACCAACGTTCATGAAATCATCAACTGCTTCAAGCTGCGTGAACAAATCC
GCCACATGTCCCATAAAAATGTTTTGCTGAGTGTGTTGGAAAAATTTGTATCGCCCTATATCAATCTTACCCCTAAAGAA
CAACAAGACCCTGAGGGCAACAAATTACCAGCGCTGACCAATCTGGGCATGGGCTATGTATTTGAAGAACTGATTCGTAA
ATTTAACGAAGAAAATAACGAAGAAGCTGGCGAACACTTTACCCCACGCGAAGTGATCGAGCTGATGACGCATTTAGTTT
TTGATCCGCTCAAAGACCAAATTCCGGCCATTATTACGATTTACGACCCAGCTTGCGGCAGCGGTGGCATGCTGACCGAG
TCGCAAAACTTTATTGAGCAAAAATATCCGCTATCTGAATCACAAGGCGAGCGTTCCATCTTTTTGTTTGGTAAAGAAAC
CAATGATGAAACCTATGCCATTTGTAAATCTGACATGATGATTAAAGGTGATAATCCCGAAAACATCAAAGTCGGCTCAA
CCCTTGCTACAGATAGCTTCCAAGGTAATCACTTTGACTTTATGCTTTCCAACCCGCCATATGGCAAAAGCTGGAGCAAA
GATCAAGCCTATATCAAAGACGGCAATGAGGTGATCGACAGTCGCTTTAAAGTTACCTTACCAGATTACTGGGGCAATGA
AGAAACCCTCGATGCCACCCCACGCTCCAGCGATGGTCAGCTGCTTTTCCTGATGGAAATGGTCAACAAAATGAAATCCC
CGAAAAACAACAAAATCGGCAGCCGTGTTGCCTCTGTGCATAACGGCTCAAGCCTGTTTACTGGCGATGCAGGTTCAGGA
GAAAGCAACATCCGTCGCCATATTATTGAAAACGATTTGCTGGAGGCCATCGTACAGCTGCCTAACAACCTGTTCTACAA
CACAGGCATTACCACCTATATTTGGTTGCTGTCCAACAATAAACCTGAAGCACGCAAAGGCAAAGTTCAGCTGATTGATG
CCAGCCTCTTGTTCCGTAAATTGCGTAAAAACCTTGGCGACAAAAACTGCGAATTTGCCCCGGAGCATATTGCGGAAATT
ACTCAAAACTATCTTGATTTCACCGCCAAAGCGCGCGAAACCGACAGCCAAAACGAAGCAGTCGGCCTAGCTTCACAGAT
TTTTGACAATCAAGATTTCGGCTATTACAAAGTTACCATCGAACGCCCGGATCGCCGTTCTGCACAATTTACCGCAGAAA
ATATTGCGCCTTTACGTTTTGACAAAGCCTTGTTTGAGCCGATGCAATATCTTTATCAGCAACATGGCGAACAAATTTAC
AACGCCGGATTTTTAGCCAAAACCGAGCCAGAAATCAGCACTTGGTGTGAGGCGCAAGGGATTGCCTTAAACAACAAAAA
CAAAGCCAAGTTGCTGGATGTCAAAACGTGGGAAAAAGCCGCCGCACTTTTTCAGACGGCATCAAAACTGCTTGAACATT
TCGGCTCAACCCAATTTGACGATTTCAACCAATTCAAACAAGCCGTGGAAGGCCGTCTGAAAGCCGAAAAAATCCCCCTT
TCTGCCACAGAGAAAAAGGCCATTTTCAATGCCGTAAGTTGGTACGATGAAAATGCCGCCAAAGTGATTGCCAAAACACT
CAAGCTCAAACCAAACGAATTGGACGCCCTTTGCCAACGCTACCAATGCCAAGCCGACGAGCTGGCAGATTTCGGCTATT
ACGCTACCGGCAAAGCAGGCGAATATATCCAATATGAAACCAGCAGCGACTTACGCGACAGCGAATCCATACCGCTTAAA
CAAAATATCCACGATTATTTCAAAGCCGAAGTGCAACCGCACATCAGCGAAGCATGGCTGAATATGGAAAGCGTGAAAAT
CGGCTATGAAATCAGCTTCAACAAATACTTCTACCGCCATAAGTCATTGCGCAGCCTTGAGGAAGTTACCCAAGACATTC
TTGCGCTGGAAAAACAGGCTGACGGCTTGATTAGTGAAATTTTAGAGGCTTAA

Protein sequence :
MDHSVHNKLVSFIWSIADDCLRDVYVRGKYRDVILPMFVLRRLDTLLEPSKDAVLEEMRFQKEELAFTELDDLPLKKITG
HVFYNTSKWTLKSLYQTASNTPQYMLANFEEYLDGFSTNVHEIINCFKLREQIRHMSHKNVLLSVLEKFVSPYINLTPKE
QQDPEGNKLPALTNLGMGYVFEELIRKFNEENNEEAGEHFTPREVIELMTHLVFDPLKDQIPAIITIYDPACGSGGMLTE
SQNFIEQKYPLSESQGERSIFLFGKETNDETYAICKSDMMIKGDNPENIKVGSTLATDSFQGNHFDFMLSNPPYGKSWSK
DQAYIKDGNEVIDSRFKVTLPDYWGNEETLDATPRSSDGQLLFLMEMVNKMKSPKNNKIGSRVASVHNGSSLFTGDAGSG
ESNIRRHIIENDLLEAIVQLPNNLFYNTGITTYIWLLSNNKPEARKGKVQLIDASLLFRKLRKNLGDKNCEFAPEHIAEI
TQNYLDFTAKARETDSQNEAVGLASQIFDNQDFGYYKVTIERPDRRSAQFTAENIAPLRFDKALFEPMQYLYQQHGEQIY
NAGFLAKTEPEISTWCEAQGIALNNKNKAKLLDVKTWEKAAALFQTASKLLEHFGSTQFDDFNQFKQAVEGRLKAEKIPL
SATEKKAIFNAVSWYDENAAKVIAKTLKLKPNELDALCQRYQCQADELADFGYYATGKAGEYIQYETSSDLRDSESIPLK
QNIHDYFKAEVQPHISEAWLNMESVKIGYEISFNKYFYRHKSLRSLEEVTQDILALEKQADGLISEILEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1769 NP_231404.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 71
VC0395_A1367 YP_001217310.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 71
VPI2_0017c ACA01834.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 71

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CGSHiGG_03080 YP_001291999.1 putative type I restriction-modification system, methyltransferase subunit VFG1102 Protein 0.0 71