Gene Information

Name : CGSHiEE_02555 (CGSHiEE_02555)
Accession : YP_001290339.1
Strain : Haemophilus influenzae PittEE
Genome accession: NC_009566
Putative virulence/resistance : Virulence
Product : anaerobic C4-dicarboxylate transporter
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1638
EC number : -
Position : 503180 - 504076 bp
Length : 897 bp
Strand : -
Note : COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component

DNA sequence : 
ATGAATGCTGGAACTTCATCAAATGAATATAAAGCGGCAGAAATGTTTGCCAAAGAAGTCAAAGAAAAATCACAGGGTAA
AATTGAAATTTCACTTTATCCAAGTTCACAATTAGGTGATGACCGTGCAATGTTAAAACAATTAAAAGACGGTTCTCTCG
ACTTCACCTTTGCAGAATCTGCTCGCTTCCAGTTGTTTTACCCTGAAGCAGCAGTATTTGCCTTACCTTATGTTATTAGC
AACTATAATGTTGCACAAAAAGCCTTATTCGATACAGAATTTGGTAAAGATTTAATTAAAAAAATGGATAAAGATCTTGG
CGTGACTTTACTTTCCCAAGCTTATAACGGAACTCGCCAAACGACTTCAAATCGTGCAATCAACAGTATTGCAGATATGA
AAGGCTTAAAACTTCGTGTACCAAATGCAGCAACAAACTTAGCCTATGCTAAATATGTTGGCGCATCACCAACACCAATG
GCATTTTCTGAAGTTTATCTTGCGTTACAAACCAATGCCGTCGATGGTCAAGAAAACCCGTTAGCAGCGGTGCAAGCACA
AAAATTCTATGAAGTGCAAAAGTTCTTAGCAATGACTAATCATATTTTGAATGACCAACTTTATTTAGTAAGCAACGAGA
CTTATAAAGAACTCCCTGAAGATCTTCAAAAAGTCGTAAAAGATGCTGCCGAAAATGCAGCAAAATATCACACTAAATTA
TTCGTAGATGGAGAGAAAGATTTAGTCACATTCTTTGAAAAACAAGGCGTGAAAATTACACATCCTGATCTTGTCCCATT
TAAAGCATCAATGAAGCCGTATTATGCTGAGTTTGTAAAACAAACTGGTCAAAAAGGTGAAGCAGCTTTAAAACAAATTG
AAGCAATCAATCCATAA

Protein sequence : 
MNAGTSSNEYKAAEMFAKEVKEKSQGKIEISLYPSSQLGDDRAMLKQLKDGSLDFTFAESARFQLFYPEAAVFALPYVIS
NYNVAQKALFDTEFGKDLIKKMDKDLGVTLLSQAYNGTRQTTSNRAINSIADMKGLKLRVPNAATNLAYAKYVGASPTPM
AFSEVYLALQTNAVDGQENPLAAVQAQKFYEVQKFLAMTNHILNDQLYLVSNETYKELPEDLQKVVKDAAENAAKYHTKL
FVDGEKDLVTFFEKQGVKITHPDLVPFKASMKPYYAEFVKQTGQKGEAALKQIEAINP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1779 NP_231414.1 C4-dicarboxylate-binding protein Not tested VPI-2 Protein 4e-67 51
dctP-1 YP_001217320.1 C4-dicarboxylate-binding periplasmic protein Not tested VPI-2 Protein 4e-67 51
VPI2_0027c ACA01844.1 C4-dicarboxylate-binding periplasmic protein Not tested VPI-2 Protein 2e-67 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CGSHiEE_02555 YP_001290339.1 anaerobic C4-dicarboxylate transporter VFG1112 Protein 2e-67 51