Gene Information

Name : rdgC (CGSHiEE_01520)
Accession : YP_001290167.1
Strain : Haemophilus influenzae PittEE
Genome accession: NC_009566
Putative virulence/resistance : Unknown
Product : recombination associated protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2974
EC number : -
Position : 283391 - 284299 bp
Length : 909 bp
Strand : +
Note : Required for efficient pilin antigenic variation

DNA sequence :
ATGTGGTTCAAAAATTTAATGACTTATAGACTGACTAAACCGCTAGATTGGGATCTTGCACAGCTACAAACTCAACTGGA
AGATTGTCAATTTCATCCTTGCGGTGCTCAAGATCAAAGTAAATTTGGTTGGTCTGCGCCATTAAGAGGTTCTGATTTAC
TCTATTTTTCTGTTGGAAAACAAATTCTATTAATCGCCAAAAAAGAAGAAAAAATCTTGCCGGCAAATGTGGTCAAACGT
GAATTAGATGACCGCATTGAAAGCCTCGAACAAAAAGAAAACCGCAAACTTAAAAAGGTAGAAAAACAAACATTAAAAGA
TGATGTTGTTATGAATTTATTGCCTCGTGCGTTTAGTAAAAATCAGCATACGGCGCTATGGATTGATACGGAAAATAATC
TTGTTCATGTTGATGCCGCATCAAGTAAACGCGCGGAAGATGCGCTTGCATTACTGCGGAAATCCTTAGGTTCGCTCCCT
GTCGTGCCTTTAGCCTTTGCTAATGAACCCAGCACGATTTTAACCAATTGGATCCTTCAAGATACTTTACCGCATTGGTT
ACTTGCATTAGAAGAAGCGGAGCTTCGTGGCAGTCAGGAAGACAGCGTTATTCGTTGTAAAAAACAACCTTTAGAAAATG
AAGAAATTCTCGCTCTTCTGCAAGATGGCAAAAAAGTAGTAAGTAAATTAGCCTTAGAATGGGAGGATACCTTAACTTTC
GTTTTTAACGAGGATTGCACAATCAAACGTTTAAAATTTGCAGATAGTATACGTGAAAAAAATGATGATATTCTGAAAGA
AGATTTTACACAGCGTTTCGATGCAGATTTTGTACTGATGACAGGTATTTTAGCCAAACTCACGGAAAATTTATTAGATG
AATTTGGTGGCGAAAAAACGAGATTATAA

Protein sequence :
MWFKNLMTYRLTKPLDWDLAQLQTQLEDCQFHPCGAQDQSKFGWSAPLRGSDLLYFSVGKQILLIAKKEEKILPANVVKR
ELDDRIESLEQKENRKLKKVEKQTLKDDVVMNLLPRAFSKNQHTALWIDTENNLVHVDAASSKRAEDALALLRKSLGSLP
VVPLAFANEPSTILTNWILQDTLPHWLLALEEAELRGSQEDSVIRCKKQPLENEEILALLQDGKKVVSKLALEWEDTLTF
VFNEDCTIKRLKFADSIREKNDDILKEDFTQRFDADFVLMTGILAKLTENLLDEFGGEKTRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_00998 YP_001437103.1 hypothetical protein Not tested Not named Protein 7e-65 49