Gene Information

Name : xerD (CGSHiEE_01505)
Accession : YP_001290164.1
Strain : Haemophilus influenzae PittEE
Genome accession: NC_009566
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 280420 - 281313 bp
Length : 894 bp
Strand : -
Note : site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers d

DNA sequence : 
ATGAAAAATCTTGCACTTATTGATTTGTTTCTTAACGAATATTGGATTGAAAAAGGGCTTTCAGAAAATACCGTTCAATC
TTATCGTTTGGATTTAACCGCACTTTGTGATTGGTTGGATAAAAATGACTTGTCTTTGGAAACTTTAGATGCTGTTGATT
TGCAAGGTTTTCTGGGGGAACGTTTGGAGAAAGGTTACAAAGCCACAAGCACCGCGCGAATGTTAAGTGCAATGCGTAAA
CTTTTCCAATATTTATATCGGGAAAAATACCGAGTAGATGATCCAAGTGCGGTGCTAAGTTCGCCTAAATTACCCAGTCG
CTTGCCAAAATATTTAACTGAGCAACAAGTATCAGATTTGCTCAATACGCCAGATGTGGAAGTCCCTTTGGAATTGCGTG
ATAAGGCAATGTTAGAGTTGCTTTATGCGACGGGGCTTCGTGTAACGGAGTTAGTTTCGCTTACGATTGAAAACATGAGC
GTGCAACAAGGCGTGGTGCGCGTGATTGGTAAAGGGAACAAGGAACGTATTGTGCCAATGGGGGAAGAAGCTGCCTATTG
GGTTCGTCAATTTATGCTTTATGGTCGCCCTGTTCTCTTAAATGGGCAGAGTTCTGATGTTGTGTTTCCAAGTCAGCGCG
CACAGCAAATGACTCGTCAAACTTTCTGGCATCGTGTAAAACATTATGCCATTCTCGCAGATATTGATGCTGATGCACTT
TCCCCTCACGTTCTTCGCCATGCTTTTGCCACCCATTTAGTGAATCATGGTGCGGATTTACGTGTGGTGCAAATGTTGCT
AGGGCATACAGATTTATCCACAACACAGATTTATACTCATGTGGCAAAAGAGAGATTGAAACGATTGCATGAAAGATTTC
ATCCTAGAGGATAA

Protein sequence : 
MKNLALIDLFLNEYWIEKGLSENTVQSYRLDLTALCDWLDKNDLSLETLDAVDLQGFLGERLEKGYKATSTARMLSAMRK
LFQYLYREKYRVDDPSAVLSSPKLPSRLPKYLTEQQVSDLLNTPDVEVPLELRDKAMLELLYATGLRVTELVSLTIENMS
VQQGVVRVIGKGNKERIVPMGEEAAYWVRQFMLYGRPVLLNGQSSDVVFPSQRAQQMTRQTFWHRVKHYAILADIDADAL
SPHVLRHAFATHLVNHGADLRVVQMLLGHTDLSTTQIYTHVAKERLKRLHERFHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-53 47
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-53 47