Gene Information

Name : CGSHiEE_01215 (CGSHiEE_01215)
Accession : YP_001290112.1
Strain : Haemophilus influenzae PittEE
Genome accession: NC_009566
Putative virulence/resistance : Virulence
Product : iron (chelated) ABC transporter permease protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 229166 - 229981 bp
Length : 816 bp
Strand : +
Note : COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components

DNA sequence : 
ATGTTTGATTGGCTTTTAGAACCGCTACAATTTGAGTTTATGCAAAATGCCTTATTGACCGCATTGATTGTTTCGATTAT
CTGTGCGTTACTTTCTTGCTATTTAGTCTTGAAAGGTTGGTCATTAATGGGTGATGCAATTTCTCACGCTGTATTACCTG
GTATTGTACTTGCTTATTTGGCAGGAATTCCTTTAGCCATTGGTGCATTTTTCTCAGGTATTTTTTGTTCGCTTGGTGTG
GGATATTTGAAAGAAAATAGCCGTATAAAAGAAGATACCGCAATGGGCATTGTATTTTCTGGAATGTTTGCTATTGGTTT
GGTTATGTTTACCAAAATTCAAACAGAACAGCATTTAACCCATATTTTGTTTGGTAATGTGTTGGGTGTAAGTCATCAAG
AGCTGATTCAAAGTGCGGTCATTTCTGCGATAATTTTTTGTTTGATTGTTTTCAAACGTAAAGACTTTTTGCTTTATTGT
TTTGATCCAAGCCACGCCCGTGTTGCAGGGCTTTCTCCTAAAATTTTACATTATGGTTTATTAATTCTACTTGCTTTAAC
CATTGTAAGCACGATGCAAGTGGTAGGTGTTATTTTGGTGGTGGCAATGTTAATTGCGCCAGGAATTACCGCACTTACTC
TTACTAAATCTTTTGATAAAATGTTATGGGTTGCTATTGCAAGTTCCATTGCATCAAGCCTAATTGGCGTAATCTTGAGC
TATCATTTTGATGCCTCAACAGGTGCTTGTATTATTCTTCTGCAAGCCGCATTTTTTGTTATAGCATTAGCTTATAGCAA
GATTAGAATAAGATAA

Protein sequence : 
MFDWLLEPLQFEFMQNALLTALIVSIICALLSCYLVLKGWSLMGDAISHAVLPGIVLAYLAGIPLAIGAFFSGIFCSLGV
GYLKENSRIKEDTAMGIVFSGMFAIGLVMFTKIQTEQHLTHILFGNVLGVSHQELIQSAVISAIIFCLIVFKRKDFLLYC
FDPSHARVAGLSPKILHYGLLILLALTIVSTMQVVGVILVVAMLIAPGITALTLTKSFDKMLWVAIASSIASSLIGVILS
YHFDASTGACIILLQAAFFVIALAYSKIRIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD NP_461785.1 permease Virulence SPI-1 Protein 1e-56 55
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 8e-57 55
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-56 54
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 2e-56 54
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 2e-56 54

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CGSHiEE_01215 YP_001290112.1 iron (chelated) ABC transporter permease protein BAC0442 Protein 2e-69 63
CGSHiEE_01215 YP_001290112.1 iron (chelated) ABC transporter permease protein BAC0352 Protein 5e-57 55
CGSHiEE_01215 YP_001290112.1 iron (chelated) ABC transporter permease protein BAC0441 Protein 3e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CGSHiEE_01215 YP_001290112.1 iron (chelated) ABC transporter permease protein VFG0528 Protein 4e-57 55