Gene Information

Name : CGSHiEE_01210 (CGSHiEE_01210)
Accession : YP_001290111.1
Strain : Haemophilus influenzae PittEE
Genome accession: NC_009566
Putative virulence/resistance : Virulence
Product : iron (chelated) ABC transporter permease protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 228325 - 229173 bp
Length : 849 bp
Strand : +
Note : COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components

DNA sequence : 
ATGTTAGATTTATTGCTTGAACCTTTTTCCTATGATTATATGCTCAAGGCGATGATTTTGAGTACCGCAGTGGGTGCTAT
TTGTGCTTTTTTGTCTTCATATTTAATGCTTAAAGGCTGGTCTCTAATTGGCGACGCGCTTTCCCATTCTGTCGTGCCCG
GTGTCGCAATTGCCTATGCTTTTGCGTTGCCTTACGCACTTGGTGCATTTTTTGCCGGAATTTTAGCCGCACTTTCCATT
CTTTGGATTAAATCCATTTCTAAACTGAAAGAAGATGCCGTTATCGGCTTTATTTTCAGTACTTTCTTTGCATTAGGACT
ATTGATCATTTCTTTAAATCCAACCGCAGTAGATGTGCAAAGTATCATTTTAGGCAATATTTTAGGTATTGCTGATGAAG
ATATTTATCAAGTGGCAATTATCATCGGTGTTTGTTTAGTATTGCTTTTATTATTTTGGAAGGATTTACTGCTGATTTTT
TTTGATGAAACACAAGCGATTACAGTCGGTCTTTCTCCATTATTTTATAAAATTTTATTTTTCACATTATTGAGTGCTTG
TGTGGTTGCTGCCTTGCAAACTGTAGGCGCGATTTTAGTGATTGCGATGGTCGTTACCCCAGGTGCGACAGCATATTTAC
TCACAGATAAATTCAAAACCTTGTCAATCATCGCTATTATTTTAGGGGCGGTGACAAGTTTTGTTGGGGTTTATATTAGC
TATTATTTAGATGGTGCCACAGGCGGTGTGATTGTGACATTGCAAACATTATTGTTTTTAGTCGCTTTCTTATTTTCACC
AAAATATGGCTTATTAACTCGTAATAAAAAGGCGGTAGAAAATGTTTGA

Protein sequence : 
MLDLLLEPFSYDYMLKAMILSTAVGAICAFLSSYLMLKGWSLIGDALSHSVVPGVAIAYAFALPYALGAFFAGILAALSI
LWIKSISKLKEDAVIGFIFSTFFALGLLIISLNPTAVDVQSIILGNILGIADEDIYQVAIIIGVCLVLLLLFWKDLLLIF
FDETQAITVGLSPLFYKILFFTLLSACVVAALQTVGAILVIAMVVTPGATAYLLTDKFKTLSIIAIILGAVTSFVGVYIS
YYLDGATGGVIVTLQTLLFLVAFLFSPKYGLLTRNKKAVENV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-65 63
sitC NP_461784.1 permease Virulence SPI-1 Protein 1e-65 63
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 9e-66 63
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 9e-66 63
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 8e-66 63

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CGSHiEE_01210 YP_001290111.1 iron (chelated) ABC transporter permease protein BAC0441 Protein 4e-72 72
CGSHiEE_01210 YP_001290111.1 iron (chelated) ABC transporter permease protein BAC0351 Protein 5e-66 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CGSHiEE_01210 YP_001290111.1 iron (chelated) ABC transporter permease protein VFG0527 Protein 4e-66 63