Gene Information

Name : CGSHiEE_01200 (CGSHiEE_01200)
Accession : YP_001290109.1
Strain : Haemophilus influenzae PittEE
Genome accession: NC_009566
Putative virulence/resistance : Virulence
Product : putative periplasmic chelated iron binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 226520 - 227401 bp
Length : 882 bp
Strand : +
Note : COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin

DNA sequence : 
ATGCGAAATTCATTCAAAATTATGACCGCACTTGCACTTGGTTTATTTGCAATGCAAGCTAACGCAAAATTTAAAGTCGT
AACCACTTTTACCGTGATTCAAGATATTGCGCAAAATGTGGCAGGCAATGCGGCAACAGTGGAATCTATTACCAAACCAG
GTGCTGAAATTCACGAATATGAACCAACGCCAAAAGACATTGTAAAAGCACAATCTGCTGATTTAATTTTATGGAACGGC
TTAAATTTAGAACGTTGGTTTGAGCGTTTCTTCCAAAATGTTAAAGATAAACCTGCTGTGGTAGTAACAGAAGGTATTCA
ACCATTATCTATTTATGAAGGCCCGTATAAAGATGTGCCTAATCCACACGCTTGGATGTCGCCATCTAATGCTTTAATTT
ATATTGAAAATATTAAAAATGCGTTAGTGAAATACGATCCACAAAATGCAGCTGTGTATGAAAAAAATGCCGCTGACTAT
GCTCAAAAAATTAAACAACTTGATGAACCGCTTCGTGCAAAATTAGCACAAATTCCAGAAGCGCAACGCTGGCTTGTAAC
AAGTGAAGGTGCTTTCAGTTATTTGGCGAAAGATTACAACTTAAAAGAAGGTTATTTATGGCCAATCAATGCTGAACAAC
AAGGCACACCACAACAAGTGCGTAAAGTGATTGATTTAGTTCGTAAAAACAATATTCCAGTTGTGTTTAGTGAAAGTACA
ATTTCAGCGAAACCTGCACAACAAGTAGCTAAAGAAAGTGGTGCAAAATACGGTGGCGTATTGTACGTTGATTCACTTTC
TGCGAAAAACGGCCCTGTGCCAACTTATATTGATTTGCTTAACGTCACTGTATCAACCATTGTTAAAGGATTCGGAAAAT
AA

Protein sequence : 
MRNSFKIMTALALGLFAMQANAKFKVVTTFTVIQDIAQNVAGNAATVESITKPGAEIHEYEPTPKDIVKAQSADLILWNG
LNLERWFERFFQNVKDKPAVVVTEGIQPLSIYEGPYKDVPNPHAWMSPSNALIYIENIKNALVKYDPQNAAVYEKNAADY
AQKIKQLDEPLRAKLAQIPEAQRWLVTSEGAFSYLAKDYNLKEGYLWPINAEQQGTPQQVRKVIDLVRKNNIPVVFSEST
ISAKPAQQVAKESGAKYGGVLYVDSLSAKNGPVPTYIDLLNVTVSTIVKGFGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-94 68
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 3e-94 68
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 3e-94 68
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 3e-94 68
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 2e-94 68

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CGSHiEE_01200 YP_001290109.1 putative periplasmic chelated iron binding protein BAC0439 Protein 8e-103 74
CGSHiEE_01200 YP_001290109.1 putative periplasmic chelated iron binding protein BAC0349 Protein 2e-94 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CGSHiEE_01200 YP_001290109.1 putative periplasmic chelated iron binding protein VFG0525 Protein 1e-94 68