Gene Information

Name : CGSHiEE_05780 (CGSHiEE_05780)
Accession : YP_001290902.1
Strain : Haemophilus influenzae PittEE
Genome accession: NC_009566
Putative virulence/resistance : Resistance
Product : HTH-type transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 1153427 - 1153834 bp
Length : 408 bp
Strand : +
Note : COG0789 Predicted transcriptional regulators

DNA sequence : 
ATGAAAATTGGAGCACTTGCTAAAGCCCTAGGCTGTACCGTAGAAACCATCCGTTATTATGAACAACAAGGTTTAATCCC
GCCCCCAAAACGTACTTTAGGCAATTTTCGGCAATATAATGAAGAACACTTGCAACGTTTATCATTTATTTGTAACTGCC
GAAATTTAGATATTTCATTAAGTGAAATAAAAAGCCTACTGAATTTAGAAAATGCCTCCAAACAACAAGCAGAAGAAATT
AATCGTGTGTTAGATAAACACATTAAAGAGGTGGCAACAAGGATTCACGAACTCGCCCATTTACGGATGAAATTAATTGA
ATTACGTGAAAAAACAGTCTCGAATGATGAAGATCCAATGAAATTGCTATTGCAACATAGTGGCGTGAAATTTGTGCGAT
TAAAATAG

Protein sequence : 
MKIGALAKALGCTVETIRYYEQQGLIPPPKRTLGNFRQYNEEHLQRLSFICNCRNLDISLSEIKSLLNLENASKQQAEEI
NRVLDKHIKEVATRIHELAHLRMKLIELREKTVSNDEDPMKLLLQHSGVKFVRLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 1e-21 48
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 1e-20 44
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 9e-21 44
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 6e-21 44
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 6e-21 44
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 6e-21 44
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 6e-21 44
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 8e-21 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CGSHiEE_05780 YP_001290902.1 HTH-type transcriptional regulator BAC0058 Protein 3e-26 47