Gene Information

Name : TBFG_12425 (TBFG_12425)
Accession : YP_001288354.1
Strain : Mycobacterium tuberculosis F11
Genome accession: NC_009565
Putative virulence/resistance : Virulence
Product : sulfate-transport ATP-binding protein ABC transporter cysA1
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1118
EC number : -
Position : 2708562 - 2709617 bp
Length : 1056 bp
Strand : -
Note : Mapped to H37Rv Rv2397c

DNA sequence :
ATGACCTACGCCATCGTCGTGGCCGACGCCACCAAACGCTACGGCGACTTCGTCGCACTTGACCACGTGGATTTCGTCGT
ACCGACCGGTTCGCTGACCGCATTGTTGGGCCCCAGCGGTTCGGGCAAGTCGACGCTGTTGCGCACCATAGCCGGCCTCG
ACCAACCGGACACCGGAACCATCACGATCAACGGCCGCGACGTCACCCGGGTGCCGCCACAGCGGCGTGGCATCGGATTC
GTCTTCCAGCACTACGCGGCGTTCAAACACCTGACTGTCCGTGACAACGTGGCGTTCGGGTTGAAGATCCGTAAGCGCCC
CAAGGCCGAGATCAAGGCCAAGGTCGACAATCTGCTGCAGGTGGTGGGCCTGAGCGGATTTCAGAGCCGCTACCCCAATC
AGCTCTCCGGTGGGCAACGACAGCGGATGGCGCTGGCCAGGGCGCTGGCGGTCGATCCGGAGGTGCTGCTGCTCGACGAG
CCGTTCGGCGCACTCGATGCCAAGGTGCGCGAAGAGCTGCGTGCCTGGCTGCGCCGCCTGCACGACGAGGTGCATGTCAC
CACGGTGCTGGTCACCCACGATCAGGCCGAAGCGCTGGATGTGGCCGACCGCATCGCCGTACTCCACAAGGGCCGTATCG
AGCAGGTCGGATCCCCGACCGACGTTTACGACGCCCCGGCGAACGCCTTCGTGATGTCCTTCTTGGGAGCGGTTTCCACG
TTGAACGGCTCCCTGGTGCGCCCGCACGACATCCGGGTCGGCCGGACTCCCAATATGGCCGTGGCCGCCGCTGACGGCAC
CGCCGGGTCCACCGGTGTGCTACGGGCTGTTGTGGATCGGGTGGTGGTGCTGGGCTTCGAGGTCCGCGTGGAGTTGACCA
GCGCGGCCACCGGCGGGGCCTTCACCGCCCAGATCACCCGCGGCGATGCCGAGGCGCTGGCCCTACGCGAGGGTGACACC
GTCTACGTGCGTGCCACCCGGGTGCCGCCGATTGCCGGTGGCGTATCGGGCGTCGACGATGCCGGCGTGGAACGGGTCAA
AGTCACATCGACGTGA

Protein sequence :
MTYAIVVADATKRYGDFVALDHVDFVVPTGSLTALLGPSGSGKSTLLRTIAGLDQPDTGTITINGRDVTRVPPQRRGIGF
VFQHYAAFKHLTVRDNVAFGLKIRKRPKAEIKAKVDNLLQVVGLSGFQSRYPNQLSGGQRQRMALARALAVDPEVLLLDE
PFGALDAKVREELRAWLRRLHDEVHVTTVLVTHDQAEALDVADRIAVLHKGRIEQVGSPTDVYDAPANAFVMSFLGAVST
LNGSLVRPHDIRVGRTPNMAVAAADGTAGSTGVLRAVVDRVVVLGFEVRVELTSAATGGAFTAQITRGDAEALALREGDT
VYVRATRVPPIAGGVSGVDDAGVERVKVTST

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 8e-37 45
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-37 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TBFG_12425 YP_001288354.1 sulfate-transport ATP-binding protein ABC transporter cysA1 VFG1206 Protein 3e-34 41