Gene Information

Name : PsycPRwf_0954 (PsycPRwf_0954)
Accession : YP_001279854.1
Strain : Psychrobacter sp. PRwf-1
Genome accession: NC_009524
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 1140394 - 1142130 bp
Length : 1737 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence :
ATGCCCGTAAGCCCCGCCAACCCCTCCGATTCTGCTTGTCATCCGGCTCAATCTACTAAGATTGACGGCTCATCTATTAA
TCATAATTGTGCTGAGCAATATGGCGGTGAGCCGGTGCTGAGCGTCAGTCACCTACATATTGCGCAAGCACACACTGTGC
TGGTGCAGGATCTATCCTATCGGCTGTATCAAAAGCAAACTTTGGCCATCGTTGGCGAGTCCGGCTCTGGTAAGTCTTTA
TCGAGCTTGGCGCTACTTGGCTTATTGCCTGAGAGCTTAAGCGTTAAGGGGACGGTCAGCTTACAGCAGGTAGGCGAGTT
GCCCATCACCCAGCAGCCGGATGGCTTTGCTAGGCGTCAAGTTAAGCGTGAGCGTATTTTAAAGCAAGTCCGCGGGGCAA
AAATTGCGATGGTGTTCCAAGAGCCAATGACAGCCTTAAACCCACTGCATACAGTAGGCAAGCAAATTGCTGAGAGTCTG
CGCTTGAGTGGCCTCCCAAAATCTCAGATTAAAGCGCGCATTATTGAGCTGTTAAATGATGTCAATATCAAGCAGCCTGA
GCAAAAATTAAATCGCTATCCGCATGAGCTCTCAGGGGGGCAGCGTCAGCGGGTAATGATTGCTATGGCGCTTGCTCAAA
ACCCCGATGTGCTCATTGCCGATGAGCCCACCACCGCCCTTGATGTCAGCTTGCAGCATGAGATTCTTGAGCTGCTTAAT
CGGCTAAAACAACAAAAAGGCATGGCGATGTTGCTGATCAGCCATGATCTGAACCTAGTACGCCGCTATAGCCATCAAAT
CATTGTGATGCAGCAAGGCACAGTGGTGGAGCAAGGGCTAAGTGAGCAGATTTTTAACCATCCCAAAAGCGCTTATACCC
TGTCATTAATTAACCAAAACTTTGGCCCAGCGCTATCTTTATCAGATGATAGCGATACCGTACCTATTATTAAAGCCATC
AACTTATCAATTGCCTTTGCTGCCAAAAAAAGTCTGCTGGGCGGGGTGAGTGAGTGGGCACCTGCAGTAAACAATGTCAG
CTTTGAGTTGGCCCGTGGCGCCTCGTTAGGTATTGTGGGTGAGTCAGGCTCAGGCAAGACCACCATCGCCTTGGCCTTGT
CTCGATTGCTCAGTACTCAGGCTCAGGTAAGCGGCGAGATTGACGTGGCAGGCATAAAAGTAAATAGCCTAAGCAAAAGT
AAGCTGCGTCACTTTCGTTCTACCTTACAAATGGTGTTTCAAGATCCTTTCGCCAGTATCAATCCACGATTTAACGTCAT
GCAAATCATTGAAGAAGGTCTATTGGTAAAAGGGGTGGACAAGGCTGAGCGTGAAAAGGCAGTGATTGACGTGCTACAAA
CGGTGAACTTACCGCCAGACTTTGTTTATCGCTATCCACATGAGCTGTCAGGAGGTCAACGTCAAAGAGTGGCACTGGCA
CGTGCACTGATTATGCGTCCAAAGGTTATCATCTTAGATGAGCCGACCTCTGCCTTAGATAGCAGCACCCAGGTGGCTGT
GGTGCATCTACTAAGAGATATCCAGGCTCGGTTTGGTATCAGCTATATCTTTATCAGCCATGATCTAAAAGTTGTGCAGG
CTTTGTGTCAGCACATTATGGTATTAAAGGCGGGGGCGTGTGTCGAATATCAACCCACTCAGCAGTTGTTTGAGAATCCT
CAGCATCCTTATTCAAAGTTACTGATTGATACCAGTGCCCATAGCCAGCAGTTTTAA

Protein sequence :
MPVSPANPSDSACHPAQSTKIDGSSINHNCAEQYGGEPVLSVSHLHIAQAHTVLVQDLSYRLYQKQTLAIVGESGSGKSL
SSLALLGLLPESLSVKGTVSLQQVGELPITQQPDGFARRQVKRERILKQVRGAKIAMVFQEPMTALNPLHTVGKQIAESL
RLSGLPKSQIKARIIELLNDVNIKQPEQKLNRYPHELSGGQRQRVMIAMALAQNPDVLIADEPTTALDVSLQHEILELLN
RLKQQKGMAMLLISHDLNLVRRYSHQIIVMQQGTVVEQGLSEQIFNHPKSAYTLSLINQNFGPALSLSDDSDTVPIIKAI
NLSIAFAAKKSLLGGVSEWAPAVNNVSFELARGASLGIVGESGSGKTTIALALSRLLSTQAQVSGEIDVAGIKVNSLSKS
KLRHFRSTLQMVFQDPFASINPRFNVMQIIEEGLLVKGVDKAEREKAVIDVLQTVNLPPDFVYRYPHELSGGQRQRVALA
RALIMRPKVIILDEPTSALDSSTQVAVVHLLRDIQARFGISYIFISHDLKVVQALCQHIMVLKAGACVEYQPTQQLFENP
QHPYSKLLIDTSAHSQQF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-69 41
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 3e-69 41
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-69 41
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-69 41