|
Name : PsycPRwf_0905 (PsycPRwf_0905) Accession : YP_001279805.1 Strain : Psychrobacter sp. PRwf-1 Genome accession: NC_009524 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 1076673 - 1078112 bp Length : 1440 bp Strand : - Note : TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase, N-terminal domain protein; DnaB domain protein helicase, C-terminal domain protein DNA sequence : ATGGCCGATAGCAAAAAGAAAACCGCCCCACAACAGAACAATGATGTTGGCTTAACTGATCTACTTAGCCAGCAGCCACC CCATAATATTGATATCGAAAAAGCGTTGATTGCCTCTTTAATGAGCATTGAGGAATCTTTTGATAAGATTTCTGACATCG TCTCAAAAGATGACTTCTACGCAGGCCGCCATCAGCATATTTTTGCCGCCATTTCGCATTTGGCATTAATTAATGAGCCT TACGACACAGTCATGGTGCATGACTGGCTAAGCTCCCAAAAACTGCTCAAGCAAGCTGGCGGTGAAAGCTATCTGGCAGA TATCTTAACCCAAAGCCCTGGCACCTTATTTAACCTAACTGCCTATGCACAGCGGGTGCGTGAGCTGTCTACTTTACGCC AATTAATAACCACTGGCAATGAGATGCTAGCACTCGCCTATGACCCACGTGAGCGCGGGGTGAGTGAAATTCTTGACACA GTAGAGTCTAAAATCTTCGCCATTAACGAGCAGCACAACAAGCGGGCTGAGCAGCGAGGTCCGGTGGATATCGGCTCAGT ACTGGTCAACGTCGTCGAACAAATGGATGAGCTTAAAAACAATCCAGACGGTATGATTGGTCTTAAAACCCCCTTTACTG AGCTCAACAACAAGACCCAAGGCCTACAACCTGGGGATCTTATTATCGTCGCCGCCCGTCCTTCTATGGGTAAGACTACC TTTGCGATGAACTTAGCCGAAGGTGTGCTTTTCCACGAAAACCTACCCGTGGTGGTGTTCTCAATGGAGATGCCAGCTGA ATCTATTGTGATGCGTTTGCTGTCCTCTTGGGGTCAGATTAACCAAACCAGTCTGCGCTCTGCCCAAATGAATGAGGATG AATGGGCACGCATGATGAATGCCATTACCCACTTGCAAGACAAAAACCTATACATCGATGACAGTACCGCCCTTCCGCCC TCTGAGCTGCGGTCACGTTGTCGCCGTATTGCCAAAAATCATGATGGCAAAATGGGCATGGTGGTGGTTGATTATCTACA ATTGATGAAAGTACCCAGCTTAAGCGGCAACCGTGTGGAAGAGATTTCTGAGATTTCTCGAAGCTTAAAAGCTTTAGCCC GTGAATTAAACTGCCCAGTGATTGCCTTATCACAGCTGAACCGAAGCTTAGAGAACCGTCCTAATAAACGCCCTATCATG TCTGACTTGCGTGAATCAGGCGCCATTGAGCAAGATGCGGATTTAATTACTTTCATCTATCGCGATGAGGTTTATAATGA GAACTCAGATTTAAAGGGTGTGGCAGAGATTATTATCGGCAAACAGCGTAACGGCCCTATTGGTACCGTTCGCCTTGCCT TTGAAGGTCAATATACTCGCTTTATTAATCTAACGCCTGATCATTATATGGCCGATGCCAGCTTCGAAAATGATGAGTAG Protein sequence : MADSKKKTAPQQNNDVGLTDLLSQQPPHNIDIEKALIASLMSIEESFDKISDIVSKDDFYAGRHQHIFAAISHLALINEP YDTVMVHDWLSSQKLLKQAGGESYLADILTQSPGTLFNLTAYAQRVRELSTLRQLITTGNEMLALAYDPRERGVSEILDT VESKIFAINEQHNKRAEQRGPVDIGSVLVNVVEQMDELKNNPDGMIGLKTPFTELNNKTQGLQPGDLIIVAARPSMGKTT FAMNLAEGVLFHENLPVVVFSMEMPAESIVMRLLSSWGQINQTSLRSAQMNEDEWARMMNAITHLQDKNLYIDDSTALPP SELRSRCRRIAKNHDGKMGMVVVDYLQLMKVPSLSGNRVEEISEISRSLKALARELNCPVIALSQLNRSLENRPNKRPIM SDLRESGAIEQDADLITFIYRDEVYNENSDLKGVAEIIIGKQRNGPIGTVRLAFEGQYTRFINLTPDHYMADASFENDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 9e-88 | 46 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 2e-77 | 46 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 6e-77 | 43 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 3e-79 | 43 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 3e-79 | 42 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 3e-78 | 42 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-75 | 41 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-75 | 41 |
