Gene Information

Name : PsycPRwf_0876 (PsycPRwf_0876)
Accession : YP_001279778.1
Strain : Psychrobacter sp. PRwf-1
Genome accession: NC_009524
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1038758 - 1041346 bp
Length : 2589 bp
Strand : +
Note : PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase

DNA sequence :
ATGAGATTTGATAAATTCACTCAAAAGCTACAAGCAGCGCTCCAACAAGCTCAAAGTCTGGCCATCGGTCGAGACCACAC
CAGTATTGGACCGGTGCATATTATGGCCGCTTTATTAGAAGATGAGTCTAATATCTCGGTATGTCAGCAAGCCGGTGCCA
GTATTCCGGCACTAAAAAATGGCGTGGCCAAAGCCTTGGACAATCAGGCAGTGATTGCCAATCCAACTGGTGAAGTCAAC
TTAAGCCCAGATGCGGTGAAAGTGCTTAACTTAGCTGACCGTCAAGCCCAAAAAGCGGGCGATGATTATATTGCTACCGA
ATGGTTATTATTGGTGTTAGCGGAACAAGGCGATACCAAAAAACTGTTTAATACAGCCGGTGTTACTGCTGAGAAATTAA
AAGCGGTTATCGAACAATTGCGGGGAGAGCAGACTGTGGACAATCAAAATGCTGAAGATCAACGTGATGCGTTAAATAAA
TATACCATTAACCTAACTGAGCGTGCCGAGCTTGGTAAGCTTGATCCTGTGATTGGCCGAGATGAAGAGATTCGTCGTAC
CATTCAGGTGTTGTCACGCCGTACTAAGAATAATCCAGTACTTATCGGTGAGCCTGGTGTGGGTAAAACCGCCATTGTTG
AGGGTTTGGCTCAAAAAATCGTTAATGGCGATGTGCCAGAGGGTCTGCGCCGTAAAGAGGTGTTATCGTTAGACTTAGGT
GCCCTAATTGCTGGTGCAAAATATCGCGGTGAGTTTGAGGAGCGTCTAAAAAGCGTGCTCAATGATTTGGCCAAGCAAGA
AGGCAATGTCATCTTATTTATCGATGAGCTACACACGATGGTGGGCGCAGGTAAGTCGGATGGGGCGATGGATGCTGGCA
ACATGTTAAAGCCTGCTTTAGCACGTGGTGAGCTACACTGTGTGGGTGCAACAACGCTGGATGAATACCGTCAGTATATT
GAAAAAGATGCTGCCCTTGAGCGCCGTTTCCAAAAAGTATTGGTCGATGAGCCAACAGTCGAGGACACCATTGCCATCTT
GCGTGGTCTAAAAGAGCGCTATGAGCTGCACCACGGGGTAGATATCCAAGACAGCGCTATTATTGCTGCGGCGCGCATGA
GTCATCGTTATATCACCGACCGTAAGCTGCCTGATAAAGCCATTGACCTGGTGGATGAGGCCGCAAGCCGTCTGCGTATG
GAGATGGACAGCAAGCCTGAAGCCTTAGGTAAGCTTGACAGCCGCTTAATTCAGCTAAAAATGCAGCGTGAAGTCTTAAA
AAATGAAGAAGATGCTGGCGCTCAAGCAGAACGTAAGGTATTAGATGAGCAGATTGAAGAGCTTGAAAAAGAGTATGCTG
ATCTTAACGAGATTTGGCAGGCAGAAAAAGCGCTGGTCAAAGGCAGTCAGCAGCTAAAAGACGAGCTGGATAAAGCGCGT
ATTGCTTATGACAAAGCCAGCCGTGAGGGTGACTATGAGACCATGAGTAAGCTGCAGTATGAGACCATTCCGCAGTTAGA
AAAACGCATCACCGAATCTGACTTAGCTGAGCAAAAAGAGCAGACGGGTGAAGGCAATGGTATCAAGCTGCTGCGCAATA
AGGTAACCGATAACGAAATTGCTGAAGTGGTGGCGGCGGCTACCGGTATTCCGGTCAACAGAATGCTACAAGGTGAGCGT
GAGAAGATGCTGACGATGGAGGAGCGCTTGCATGAGCGAGTCGTCGGTCAAGATGAAGCGGTGCAGTCAGTGGCCAATGC
GGTGCGTCGTAGCCGTGCAGGTCTATCAGACCCCAACCGTCCATCAGGCTCTTTCTTATTCTTAGGCCCAACCGGTGTGG
GTAAAACTGAGCTGACCAAATCACTGGCCAACTTCTTGTTCGATAGTGAGGATGCGATGGTGCGTATCGACATGAGTGAA
TTCATGGAGAAGCACAGTGTCAGCCGCTTAGTCGGTGCGCCTCCTGGCTATGTGGGCTATGAAGAGGGCGGTGTATTGAC
CGAAGCGGTTCGCCGTAAGCCTTATAGCGTTATCTTGTTCGATGAGGTAGAAAAAGCGCATCCTGATGTGTTTAACATTC
TACTTCAGGTGCTTGATGATGGCCGTTTAACAGATTCACAGGGGCGAGTGGTGGATTTCAAAAACACAGTCATTATCATG
ACCAGTAACTTAGGCTCGCACAAAATCCAAGAGATGGCCGGTGATGATTATGAAGAAATCAAAGCATCAGTCATGGAGTC
TGTCGGTCAGCATTTCCGCCCTGAGTTTGTGAACCGTATCGATGAGATTGTGGTTTTCCATCCACTTGGTATGTCACAGA
TGGCCGGTATTGCCGACATCCAACTGGATCGTTTACGCAGCCGCTTAAAAGAGCGTGAGATGGACATCAAGCTGTCTGCT
GATGCGATGCATATGCTGGTGGCTGTGGGTTATGACCCTGTGTATGGCGCACGTCCGCTAAAACGTGCTATCCAGCAGCA
GATCGAAAACCCCTTGTCATTAAAGCTGTTGTCGGGTGAATTTGTCGCCGGTGATACCATCCAAGTGGATGTGGATGACG
AAGATAACCTGGTTTTCACCAAAGCCTAA

Protein sequence :
MRFDKFTQKLQAALQQAQSLAIGRDHTSIGPVHIMAALLEDESNISVCQQAGASIPALKNGVAKALDNQAVIANPTGEVN
LSPDAVKVLNLADRQAQKAGDDYIATEWLLLVLAEQGDTKKLFNTAGVTAEKLKAVIEQLRGEQTVDNQNAEDQRDALNK
YTINLTERAELGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQKIVNGDVPEGLRRKEVLSLDLG
ALIAGAKYRGEFEERLKSVLNDLAKQEGNVILFIDELHTMVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYRQYI
EKDAALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVDIQDSAIIAAARMSHRYITDRKLPDKAIDLVDEAASRLRM
EMDSKPEALGKLDSRLIQLKMQREVLKNEEDAGAQAERKVLDEQIEELEKEYADLNEIWQAEKALVKGSQQLKDELDKAR
IAYDKASREGDYETMSKLQYETIPQLEKRITESDLAEQKEQTGEGNGIKLLRNKVTDNEIAEVVAAATGIPVNRMLQGER
EKMLTMEERLHERVVGQDEAVQSVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKSLANFLFDSEDAMVRIDMSE
FMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVILFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIIM
TSNLGSHKIQEMAGDDYEEIKASVMESVGQHFRPEFVNRIDEIVVFHPLGMSQMAGIADIQLDRLRSRLKEREMDIKLSA
DAMHMLVAVGYDPVYGARPLKRAIQQQIENPLSLKLLSGEFVAGDTIQVDVDDEDNLVFTKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 2e-108 42
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 2e-108 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PsycPRwf_0876 YP_001279778.1 ATPase VFG2076 Protein 8e-118 45