|
Name : PsycPRwf_0815 (PsycPRwf_0815) Accession : YP_001279717.1 Strain : Psychrobacter sp. PRwf-1 Genome accession: NC_009524 Putative virulence/resistance : Unknown Product : bifunctional HTH-domain containing protein/aminotransferase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0436 EC number : - Position : 968550 - 970181 bp Length : 1632 bp Strand : - Note : in Corynebacterium glutamicum the aminotransferase can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; this protein contains a helix-turn-helix domain at the N-terminus DNA sequence : ATGAGTGAGCAATCTGAATTTAAGGCACAAGGCGCAAGGCTCAGTAAGCTGCGTAAGGCCAAGGGTCTTACGGCTGAGCA ATTGGCTACGGCAATGACAGCGTCCGGTTCTAAAGTCAGTCGTGGCGCCATATCTAATTGGGAGCGTGGCATAAATGGGA TTGTCTCCTCCAAGCTGCCCGCTTTGGCTCATATCTTAGGCTGCTCTGAGGGCTATTTATTGCGTGGTGAGCCAGCAGAC AACGCTGAGCCAGATAATAGTACTCAACGCTCAAGCCTTGCCAGCAACCCACCCTCTATTAACTCAAACACCAATGCTAC TCCAAGCGCTATCCAGACCCCTTCTTCTCACCTAAGTACGAGCAATATCATGAAAAACACCGCCCCTACCCGTAAGCCCT TAAAAAAATCTGATAAATTACAAAACGTTTGCTACGACATCCGAGGCCCGCTCCTTAAGACAGCAATGCAAATGGAAGCT CAAGGTCAGCGCATCTTAAAGCTTAATGTCGGCAACCCCGCGCCATTTAACTTAGATGCCCCGCATGAAATCTTGCAAGA TGTGGCGCTAAACTTGCACAATGCGACCGGTTATTCAGACTCACAAGGTATTTTCTCAGCCCGAAAGGCCGTCTTACAAT ATTACCAATCAAAGGGGCTGTTATCAGCGGTTGATGTGCGTGATGTGTACCTAGGCAATGGCGTATCAGAGCTTATCGTA ATGACCATGCAAGCTTTGATGAATGATGGTGATGAGGTGCTTATCCCTATGCCAGATTATCCACTATGGACAGCCGCAGC CAATCTTGCTGGCGGCACCGCGGTACATTATCGCTGTAATGAGGAGAATAACTGGCAGCCTGATATTGAAGATATCCGTG CAAAAATTACCGATAAGACCCGTGGCATAGTGGTGATTAACCCCAATAACCCCACCGGTGCGCTCTACTCTAACGATGTG CTGCTACAAATTATCGATCTGGCACGTGAGTACAATTTAGTCCTGATGGCAGATGAAATCTACGACCGCATTTTATATGA TAATGCAGTGCATACCCCCATGTGTACCTTAGCGCAAGATGTCCTGATTTTGACCTACAATGGTCTGTCAAAGTCACATA GGATTGCCGGCTTTAGAGCGGGGTGGCTTATGCTCTCTGGTAATAAAGAACATGCCAGCGACTTCATTGAAGGCCTAGAC ATGCTCGCCTCGATGCGCTTGTGTGCTAACGTGCCAGCTCAGCATGCCATCCAAACTGCAGTAGGCGGCTATCAAAGCAT GCAGGACTTAACGGCCGAAACAGGCCGCTTATACAAGCAGCGCCAGTTGGCGGTAGAGCGTCTAAATGCCATCCCAGGTA TCTCATGCACCATGCCGCAAGGCGCCTTTTATTGCTTCCCAAAAATCGACCGCAGCATCTACCCTATTGAAGATGACATG CAGTTTATGATGGACTTATTAATTGAAGAAAAAGTGCTGATGGTACAAGGCACGGGCTTTAACTGGGATGCGCCCGATCA CTTCCGTGTGGTGTTCTTACCTAACTTATTAGATTTAGAAGATGCCATGGACAGATTGGACAGGTTCTTCAGCAACAAGC GCAAACAGTATGGTACTGATAGTTTAGGGTAA Protein sequence : MSEQSEFKAQGARLSKLRKAKGLTAEQLATAMTASGSKVSRGAISNWERGINGIVSSKLPALAHILGCSEGYLLRGEPAD NAEPDNSTQRSSLASNPPSINSNTNATPSAIQTPSSHLSTSNIMKNTAPTRKPLKKSDKLQNVCYDIRGPLLKTAMQMEA QGQRILKLNVGNPAPFNLDAPHEILQDVALNLHNATGYSDSQGIFSARKAVLQYYQSKGLLSAVDVRDVYLGNGVSELIV MTMQALMNDGDEVLIPMPDYPLWTAAANLAGGTAVHYRCNEENNWQPDIEDIRAKITDKTRGIVVINPNNPTGALYSNDV LLQIIDLAREYNLVLMADEIYDRILYDNAVHTPMCTLAQDVLILTYNGLSKSHRIAGFRAGWLMLSGNKEHASDFIEGLD MLASMRLCANVPAQHAIQTAVGGYQSMQDLTAETGRLYKQRQLAVERLNAIPGISCTMPQGAFYCFPKIDRSIYPIEDDM QFMMDLLIEEKVLMVQGTGFNWDAPDHFRVVFLPNLLDLEDAMDRLDRFFSNKRKQYGTDSLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aspC | YP_005682179.1 | Aminotransferase AlaT | Not tested | PiCp 7 | Protein | 1e-121 | 61 |
| aspC | YP_005684271.1 | Aminotransferase AlaT | Not tested | PiCp 7 | Protein | 1e-121 | 61 |
| aspC | YP_003784329.1 | aspartate aminotransferase | Not tested | PiCp 7 | Protein | 1e-121 | 61 |
| aspC | YP_005686363.1 | Aminotransferase AlaT | Not tested | PiCp 7 | Protein | 1e-121 | 61 |
