Gene Information

Name : rpmE2 (PsycPRwf_0507)
Accession : YP_001279412.1
Strain : Psychrobacter sp. PRwf-1
Genome accession: NC_009524
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L31
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0254
EC number : -
Position : 604291 - 604569 bp
Length : 279 bp
Strand : +
Note : RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially g

DNA sequence :
ATGCGTAAAGATATCCACCCAGAATACCAAGAAGTATTATTCCACGACACTAACGCTGACGTGTTCTTCTTAACCCGTTC
AACTGCTAAAACTAAAGCTACTCGTGAGTATGAAGGTAAAGAATATCCTTACTACCCACTAGATATCTCTAGCGCTTCTC
ATCCTTTCTACACTGGCGAACAACGCAAAACTTCTAACGAAGGTCGTGTTGCAAGCTTCAACAAACGCTTTGGTGCGTTT
GGTGGCCGTAGCAAGGCTAAGAAAACTGACGCTGAGTAA

Protein sequence :
MRKDIHPEYQEVLFHDTNADVFFLTRSTAKTKATREYEGKEYPYYPLDISSASHPFYTGEQRKTSNEGRVASFNKRFGAF
GGRSKAKKTDAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rpmE2 NP_286687.1 50S ribosomal protein L31 Not tested TAI Protein 5e-16 50
rpmE2 NP_287095.1 50S ribosomal protein L31 Not tested TAI Protein 5e-16 50